Anaerostipes rhamnosivorans: AR1Y2_1398
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Entry
AR1Y2_1398 CDS
T05962
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
arf
Anaerostipes rhamnosivorans
Pathway
arf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
arf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AR1Y2_1398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arf03021
]
AR1Y2_1398
Transcription machinery [BR:
arf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AR1Y2_1398
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
HTH_10
Motif
Other DBs
NCBI-ProteinID:
QCP34852
UniProt:
A0A4P8IB06
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All DBs
Position
1426120..1427214
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AA seq
364 aa
AA seq
DB search
MDDTMLQFSEKLAGLVELGKKNKNFLEYAQIETYFKDFKLTSDMMEAIFDYLEQNGIDVL
TIPEGDEDEDLEIKEEIEEEADLTIPDGVSIEDPVRMYLKEIGKVPLLSADEEIRLAQRM
EEGDEEAKKKLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYRKGYKFS
TYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPLPEEIAEEMD
IPVDRVREILKISQEPVSLETPIGEEEDSHLGDFIQDDNVPVPADAAAFTLLKEQLSEVL
GTLTEREQKVLRLRFGLDDSRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSRKLK
DYLD
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggacgacacaatgttacaattcagcgagaagctggcaggtttagtagaactggggaag
aaaaataaaaactttttggagtatgctcagattgagacatatttcaaagattttaagctg
acatcggatatgatggaggcgatttttgattacctggaacaaaatgggattgacgtgctc
acgattccagagggagacgaggacgaagatctggagatcaaagaagagattgaggaagaa
gcggatctgaccatcccggatggagtcagtatcgaagatcctgtgcgcatgtacttaaaa
gaaataggaaaagtaccgctgctcagcgccgatgaggaaatccgcctggcacaaaggatg
gaagaaggggacgaggaagcgaagaagaaactggcggaagccaacttgcgtctcgttgtc
agtatcgcaaaacgctatgtggggcgggggatgctgttccttgacctgatccaggaggga
aatctcggactgatcaaagcagtggagaagtttgattacagaaaaggatataagttcagc
acctatgccacatggtggatccgtcaggccattaccagagctattgctgaccaggcgaga
acgatccgtattcctgtgcatatggtggagaccatcaataaactgatccgtgtatccaga
cagttgttacaggagcttggccgggaaccacttcctgaggagattgcggaggagatggat
attccggtggaccgtgtccgggagattttaaagatttcccaggagccggtttctttggag
accccgatcggcgaggaagaggacagccatctgggagactttatacaggatgacaatgta
ccggtgccggcggatgccgcggcatttacactgctcaaggagcagctgagtgaagttctg
ggaactctcactgagcgggagcagaaggtgttaagactgcgcttcggtctggatgacagc
cgcgccaggactttagaggaagtaggaaaagagtttaacgtcacaagagagagaatccgt
cagatcgaagctaaggctttgagaaagctgagacatccgagccgcagcagaaaactgaaa
gattatctggattaa
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