Anaerostipes rhamnosivorans: AR1Y2_3254
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Entry
AR1Y2_3254 CDS
T05962
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
arf
Anaerostipes rhamnosivorans
Pathway
arf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AR1Y2_3254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arf03019
]
AR1Y2_3254
03009 Ribosome biogenesis [BR:
arf03009
]
AR1Y2_3254
Enzymes [BR:
arf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AR1Y2_3254
Messenger RNA biogenesis [BR:
arf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AR1Y2_3254
Ribosome biogenesis [BR:
arf03009
]
Prokaryotic type
rRNA helicases
AR1Y2_3254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
FlgT_C
UTP25_NTPase-like
Cas3-like_C_2
Card1_endonuc
Motif
Other DBs
NCBI-ProteinID:
QCP36708
UniProt:
A0A4P8IFS9
LinkDB
All DBs
Position
complement(3273052..3274662)
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AA seq
536 aa
AA seq
DB search
MKEKDTEEFMDAVRFDELNIDDKILKAVKEMGFEAASPIQGAAIPVVLEGRDIVGQAQTG
TGKTAAFGIPLLEKLDPKLKKPQAMILCPTRELAIQVADEIRKLAKFMSGAKVLPIYGGQ
NITNQIRSLKTGANIIVGTPGRIMDHMRRHTLKLEDLKMIVLDEADEMLNMGFREDIESI
LVEVPEERQTLLFSATMPKAILDITKKYQKNSKLIKVVRKELTVPNIEQFYYEVRPKQKV
EVLCRLLDMHSPKLSIVFCNTKRMVDEVTGELKGRGYFAEGLHGDLKQSQRDRVMKSFRG
GRVDILVATDVAARGIDVDNVDAVFNYDLPQDDEFYVHRIGRTGRAGRTGNAFTFVAGKE
IYKLRDVQRYCKTKIKARPIPSLNDVQATRAEKTLEEITGLIEENNLDKYVDMLDEFINE
TDYTALEIAAAFLKKQISENEEEVRQGDDFGDTGAEEGMVRLFINIGKKKGVRPGDILGA
IAGESSISGDLVGAIDVHDQYTFVEVPKEVAKDVLYGMSHAKIKGKSVSMEPANRK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagagaaagatacagaggaatttatggacgcagtaagatttgatgaattaaacatt
gacgataaaatattaaaagcagtaaaagagatggggtttgaagcagcctcaccgatccag
ggagcagcgatccctgtggtccttgagggtagagatattgtaggtcaggcacagaccgga
acaggaaaaacagcagcctttggtatcccgcttttagagaagctggatccgaaactgaaa
aagccgcaggccatgatcttgtgccctacaagggaattggcgatccaggtagcagatgag
atcaggaaactggcgaaatttatgtcaggggcaaaagtgctcccgatttatggaggacag
aatatcaccaaccagatccgttctttaaaaacaggagcgaatattatagtaggaacgccg
ggccgtatcatggaccatatgcgccgccataccttaaaattagaagatttaaaaatgatc
gttctggatgaagcggacgaaatgctgaacatgggattcagggaagatatagagagtatc
ctggtagaagtgccggaagaacgccagacactgttgttctccgctaccatgccaaaggca
atcctggatattacgaaaaagtaccagaagaattccaagctgatcaaagttgtgcgcaag
gaattgaccgtaccaaacattgaacagttttattatgaagtcaggccaaaacaaaaagta
gaagttctctgccgtctgttggatatgcattctccgaagctctccatcgtattctgcaat
acaaagcgtatggtagatgaagtgacaggggagttgaaaggccgtggatactttgcggaa
ggacttcacggagatttaaaacagagccagagagaccgcgtcatgaagagtttcaggggc
ggacgtgtggatatcctcgtggcaaccgatgtggcggccagagggattgatgtggacaat
gtggatgcagtctttaactatgaccttcctcaggacgatgagttttatgtacaccggatt
ggaagaaccgggcgtgcgggaagaacaggaaatgcatttacctttgtggcaggaaaagaa
atctataagttgagagatgtacagcgatactgtaaaacaaagatcaaggcaagaccgatc
ccaagtttaaatgatgtccaggcaaccagagcagaaaagactctggaagagatcacgggg
ctgattgaagaaaataatctggacaaatatgtggatatgctggatgaattcatcaatgag
acagattacactgcattagagattgccgcggcattcttgaaaaagcagatttctgagaat
gaagaagaagtccgtcagggagatgattttggggacaccggcgccgaagaaggaatggtg
agattattcatcaatatcggtaaaaagaaaggtgtccgtccgggagacattctcggagcc
atcgcaggagaatccagtatttccggagatttggtaggagccatcgatgtccatgaccaa
tatacctttgtggaagtgccgaaagaagtcgcaaaagacgtactgtatggcatgagccat
gctaagatcaaaggaaagagtgtcagcatggaaccggcaaatagaaaataa
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