Anaerostipes rhamnosivorans: AR1Y2_3448
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Entry
AR1Y2_3448 CDS
T05962
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
arf
Anaerostipes rhamnosivorans
Pathway
arf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AR1Y2_3448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arf03021
]
AR1Y2_3448
03400 DNA repair and recombination proteins [BR:
arf03400
]
AR1Y2_3448
Enzymes [BR:
arf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AR1Y2_3448
Transcription machinery [BR:
arf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AR1Y2_3448
DNA repair and recombination proteins [BR:
arf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AR1Y2_3448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QCP36902
UniProt:
A0A4P8IG38
LinkDB
All DBs
Position
complement(3459607..3463182)
Genome browser
AA seq
1191 aa
AA seq
DB search
MIGSSNEYANHKIAFDAIKIGLASPEKIREWSRGEVKKPETINYRTLKPEKDGLFCEKIF
GPSKDWECHCGKYKKIRYKGVVCDRCGVEVTKANVRRERMGHIELAAPVSHIWYFKGIPS
RMGLILDISPRSLEKVLYFACYIVLDAGETDLAYKQVLTEKEYRDAYDKYGTSFRVGMGA
ESIKELLEAIDLPAEAKSLKDEFKTATGQKRARIVKRLEVVEAFLNSENNPEWMILDVVP
VIPPDIRPMVQLDGGRFATSDLNDLYRRIINRNNRLKRLLELGAPDIIVRNEKRMLQEAV
DALIDNGRRGRPVTGPGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKI
YQCGLPKEMAIELFKPFVMKELVERKLSHNIKSAKKMVEKLQPEVWDVLEDVIKEHPVML
NRAPTLHRLGIQAFEPILVEGKAIKLHPLVCTAYNADFDGDQMAVHLPLSVEAQAECRFL
LLSPNNLLKPSDGGPVAVPSQDMVLGIYYLTLEKEGDKGEGKYFKSENEAFLAYENKAIT
LHARINVRRTKVDKNGNKISKVVECTLGRILFNEIIMQDLGFVDRSDPENALNLEIDFHV
GKKQLKQILDKCINIHGATKTAEVLDDIKALGYKYSTRGALTVSISDMTVPEEKKEILAK
AQDQSEFINNQFKRGLMTEEERYKAVVKTWFDADDVLTDKLITGLDKYNNIFMMADSGAR
GSNQQIKQLAGMRGLMADTSGRTIELPIKSNFREGLDVLEYFISAHGARKGLSDTALRTA
DSGYLTRRLVDVSQDLIIREADCGLDPDGQIPGMYVEAFMDGQEVIESLQDRITGRYAAE
EIKHPETGEVLVKANHMITPRRAKTVIDAGLTKVKIRTMLTCQSQVGCCAKCYGSNMATG
QAVQVGEAVGIIAAQSIGEPGTQLTMRTFHAGGVAGDDITQGLPRIEELFEARKPKGLAI
ISEFAGKVQIKDTKKKREVVITNKETGDMKAYLIPYGSRLKVMEGQEVEAGDELTEGSVN
PHDILKIKGIRAVQDYMIREVQRVYRLQGVDINDKHVEVIVRQMLKKVRIEEGGDSEYLP
GAMIDVLEFEKTNRELEERNLETAKAEQIILGITKASLATDSFLSAASFQETTKVLTDAA
IKGKVDPLVGLKENVILGKLIPAGTGMKRYRNVKINTEEEELTLEDEIDFE
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgataggatcaagcaacgaatatgcaaatcataaaattgcctttgatgcaattaagatc
gggttggcttccccggaaaagatccgtgagtggtccaggggagaagtaaaaaaacctgaa
accatcaactatcgtaccttgaagcctgaaaaagacggacttttctgtgagaagatcttc
gggccgagcaaggactgggaatgtcattgtggtaaatataaaaaaatcagatataaaggt
gttgtctgtgaccgatgcggcgtagaggtaacaaaagccaacgtacgccgtgaacgtatg
ggacacatcgaactggcggctccggtctcccacatttggtatttcaaaggaattccaagc
cgtatgggactgatcctggatatttctccaaggagccttgaaaaagtattgtatttcgcc
tgctacatcgttctggatgcaggggagacagacctggcttacaaacaggtactgacagaa
aaagaatacagggatgcctacgacaaatacggaacttccttccgtgtggggatgggtgct
gaatccatcaaggaactgctggaagccattgatcttccggcagaggcaaaatccctgaaa
gacgaatttaagacagctacaggacagaaaagggcaaggatcgtaaaacgcctggaagtc
gtggaagccttcttaaactctgaaaacaacccggaatggatgatcctggacgttgttccg
gtcattcctcctgatatccgtccaatggtacagctggacggaggacgttttgcaacttct
gacttgaatgatctttacagaaggatcatcaaccggaacaatcgtctgaaacgtcttctg
gaacttggagctccggatattatcgtaagaaacgaaaaacgtatgctccaggaagcggtg
gatgctctgatcgacaacggccgccgtggacgtccggtcacaggaccaggtaaccgtgca
ttgaaatccctttctgatatgctgaaaggtaaacagggacgtttccgtcagaacctgctt
ggaaaacgtgttgactactcaggacgttctgttatcgttgtcgggccggaactgaagatt
taccagtgcggtctgccaaaagagatggcaatcgaattgtttaagccatttgtaatgaaa
gaactggtggaaaggaaactttcccataatataaagtctgccaagaagatggtggaaaaa
ctccagccggaagtgtgggatgtgctggaggatgtcatcaaggaacatccggttatgctg
aaccgtgcaccgactctgcatagacttggtatccaggcgtttgagccgatccttgtagaa
ggtaaggccatcaagctgcatccattggtatgtactgcttacaacgccgactttgacggt
gaccagatggctgtccatcttccgctttctgtggaagctcaggcagagtgccgtttcctt
ttattgtcaccgaacaacctgctgaaaccttccgacggaggtccggtagccgttccttct
caggatatggtcctgggaatctactatctgactctggaaaaagagggagataagggtgaa
ggcaagtactttaagtcagaaaatgaggcatttcttgcctacgagaataaagcgatcaca
ctgcacgcaaggatcaatgtaaggcgtacaaaggtcgataagaacggaaataaaatctct
aaagtcgtggaatgtactctgggaaggatcttattcaacgagatcatcatgcaggacctg
ggatttgtagaccgctctgacccggaaaacgccctgaatctggagattgatttccatgta
ggaaagaaacagttaaaacagattcttgacaaatgtatcaacatccacggtgctaccaag
accgcggaagtgctggatgatatcaaggcactcggttataagtactccacaaggggtgcc
ctgacagtttccatctccgacatgacagtgccggaagaaaagaaagaaatcctggcaaaa
gcacaggatcagtcagagtttattaacaatcagttcaaacgtggactgatgactgaggaa
gaacgttacaaggcggttgtcaagacatggtttgatgccgatgatgttctgaccgacaag
ctgattacaggattagataaatacaataacatcttcatgatggccgattccggagcccgt
ggttccaaccagcagatcaagcagctggcaggaatgcgtggactaatggccgatacgtca
ggacgtaccatcgaactgccgatcaagtcaaacttccgtgaaggtctggacgtattggag
tactttatctccgcccacggtgcgagaaagggactttccgatacggctcttagaactgcc
gattcaggatacctgacgagacgtctcgtagacgtgtcccaggatctgatcatcagagaa
gcagactgcggactggatccggacggacagattccgggtatgtacgtggaagcgtttatg
gacggacaggaagtcattgaaagtcttcaggaccgtatcacaggacgttacgctgctgag
gagatcaaacatcctgagacaggagaggtgcttgtaaaggcaaaccacatgatcacaccg
agaagagcaaagaccgtcattgatgccggacttactaaggttaagatcagaactatgctg
acctgtcagtcccaggtgggatgctgtgccaagtgttacggctccaacatggcgaccggt
caggccgtacaggtgggagaagcagtcggaatcattgctgcccagtccatcggtgagcct
ggtacacagctgaccatgcgtacgttccatgccggaggagttgccggtgacgatatcaca
cagggtcttcctcgtatcgaagagcttttcgaggcaagaaagccgaagggtcttgcgatc
atctctgagtttgcaggaaaagtgcagatcaaggatacgaagaagaaacgtgaagttgtc
atcaccaacaaagagaccggagatatgaaggcgtatctgattccttacggttccagactg
aaagtcatggaaggccaggaagtggaagccggagacgagctgacagaaggttccgtcaac
ccgcatgatatcttaaagatcaagggtatccgcgccgttcaggactatatgatccgtgaa
gtgcagagagtataccgtctgcagggtgtagatatcaacgacaagcacgtcgaggtcatc
gtgcgccagatgcttaaaaaggtccgcatcgaagaaggcggcgacagcgagtatctgcca
ggtgccatgatcgacgtactggaatttgaaaagacaaacagggagctggaagaaagaaac
ttagagactgcaaaggcggaacagatcatccttggtatcaccaaggcatctcttgccaca
gactccttcttatccgcagcatccttccaggagacaaccaaagtcctcaccgacgcggcc
atcaaaggaaaggtcgatccgctggtaggattaaaggaaaatgttatcctcggaaaactg
atccctgcaggaaccggaatgaaacggtaccgcaatgttaagatcaacacagaagaagaa
gaactgacacttgaagacgaaatcgatttcgagtag
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