Archaeon GW2011_AR20: QT11_C0001G0097
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Entry
QT11_C0001G0097 CDS
T03843
Name
(GenBank) RNA-metabolising metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
arg
Archaeon GW2011_AR20
Pathway
arg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QT11_C0001G0097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arg03019
]
QT11_C0001G0097
Messenger RNA biogenesis [BR:
arg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QT11_C0001G0097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
AJF62255
LinkDB
All DBs
Position
82890..84227
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AA seq
445 aa
AA seq
DB search
MIEVFAIGGYSEVGKNMTAIKVDDEIIILDMGLYLPAVLKYEEGDPRELTTKDLIKIGAI
PDDEVLHKYKNQVKAIVLGHCHLDHIGAAPFLARHYDCPVIGTRYTIEVLKKLLEEHEYK
LEGRLKPINSGTHLEISENLKIEFINITHSTPQTVLIAIHTKYGIIFYANDFKLDNYPVI
GAKPNYDRLKHLAEKENVLLLIMDSLYSNSEGKTPSEKVAKEMLKDVLLGTKSEGNLIII
TTFSSHIARLKSIIEFGKNLNRKIVFLGRSLFNYVKAAEASGIVNFSKNVEIIGYRSLVK
KKLREIEKQGRSNYLIVCTGNQGEPDAILTKIANKKDIQFELLPNDVIIFSCRTIPTEMT
IKNRENLEKRLKQFHARIFKEVHVSGHAFHEDHREIINLLKPKHILPIHGDHEITKGLEI
LALELGYKLNKTVHLGEDGKIIEIN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagtttttgcaattggtggctatagcgaagttggaaaaaacatgactgccatt
aaagtagatgatgaaataatcattcttgatatggggctttacctgcctgctgttttgaag
tatgaagaaggggatcctcgtgaattaacaacaaaggatttaattaaaataggggctatt
ccagatgatgaagttcttcacaagtataaaaatcaggtcaaggcaattgttctaggacac
tgccatctggatcatattggcgcggctccttttttagccaggcattatgactgtcctgta
atcggaacaagatacacaattgaagtcctaaaaaaattgcttgaggagcatgaatataag
ctagaagggaggctaaaaccgataaattcaggcactcatcttgaaatctctgaaaactta
aagatagaattcattaacatcacacattcgacaccgcaaacagttttgattgcaatccat
acaaaatatggaattattttttatgccaatgatttcaagctagataattatcctgtaatt
ggggctaaaccaaactatgatagattaaagcatttggctgaaaaagaaaatgttttattg
ttaatcatggattctttgtattcaaattcagaaggaaaaaccccgagcgaaaaagtcgcg
aaagaaatgcttaaggatgttttgctcggaacaaaaagcgaaggcaatttaatcatcatt
acaacgttttcaagtcacatcgcgagattaaagagcataattgaattcggcaaaaacttg
aatagaaaaattgtattccttggaagaagcttgtttaattatgtcaaggctgctgaagct
tcaggtatcgttaatttcagcaagaatgttgaaattattggatacaggtctttggtgaaa
aagaaattacgggagatagaaaaacaggggagaagcaattatcttattgtttgtacaggt
aatcaaggcgagccagacgcaatattaactaaaatagcaaataaaaaagacatacaattt
gaattactgccgaacgatgttataattttttcatgcagaacaattcctacggagatgaca
attaagaatcgtgaaaatttggaaaaaagacttaagcagttccatgcaagaattttcaag
gaagttcatgtttccgggcatgcatttcatgaagatcatagggaaataattaatttgcta
aagcccaagcatatcctgcccatacatggcgatcacgagattacgaaaggattggaaatt
ttggccctggaactaggatataaattaaacaagacggtccatcttggcgaggatggaaaa
ataatagagattaattag
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