Archaeon GW2011_AR20: QT11_C0001G0182
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Entry
QT11_C0001G0182 CDS
T03843
Name
(GenBank) tRNA-intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
arg
Archaeon GW2011_AR20
Brite
KEGG Orthology (KO) [BR:
arg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arg03016
]
QT11_C0001G0182
Enzymes [BR:
arg01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
QT11_C0001G0182
Transfer RNA biogenesis [BR:
arg03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
QT11_C0001G0182
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AJF62335
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All DBs
Position
complement(140577..141149)
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AA seq
190 aa
AA seq
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MAKKKSREVKEVKEEKEIKKFQINLVGDRLIAEDKHEAHNLYDQSRYGEIVDNKIQYSVV
EGLYLLEKGRVDILNEKKKLKFDDFLKEAVKKEKNFWTRYVAYGDMRNRGYIVKTALKFG
ADFRIYDRGIKPGEDHAKWIMYPVRETDSLTWYEFSAKNRVAHSTRKKLLIAVVDEENDC
TFYEIAWTRP
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaaaaatccagggaagtaaaagaggttaaggaagaaaaagaaataaagaaa
ttccaaattaacttagtcggagatagattaattgctgaggataagcatgaagcccataat
ttatatgaccagtcaagatacggcgaaattgtagataataagatacaatattctgtcgtc
gaaggattatatttacttgagaaaggaagggtcgatattttaaatgagaaaaagaaatta
aaatttgatgattttttaaaagaagctgttaaaaaagaaaaaaacttctggacaagatat
gttgcttatggggatatgagaaatcgtggttatattgtcaagacagccttaaaatttgga
gcagattttagaatttatgacaggggaataaaaccgggagaagatcatgccaaatggata
atgtatcctgtaagggaaacagattcattaacttggtatgaattttctgcaaaaaatagg
gttgcccacagtactagaaagaagttattgatagctgttgtggatgaagaaaacgactgc
actttttatgagatagcctggacaaggccgtaa
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