Archaeon GW2011_AR20: QT11_C0001G0187
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Entry
QT11_C0001G0187 CDS
T03843
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
arg
Archaeon GW2011_AR20
Pathway
arg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
arg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QT11_C0001G0187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arg03021
]
QT11_C0001G0187
Transcription machinery [BR:
arg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
QT11_C0001G0187
Prokaryotic type
Archaeal type
TFB
QT11_C0001G0187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Cyclin_N
Sigma70_r4
Cyclin_C
A2L_zn_ribbon
Zn_ribbon_SprT
HTH_AsnC-type
BRF2-like_C_cyclin_rpt
HTH_3
Ribosomal_S27e
HTH_24
SpoIIID
Zn_ribbon_PADR1
Zn_ribbon_tTFIIB
Auto_anti-p27
Zn_ribbon_LysW
zf-tcix
Motif
Other DBs
NCBI-ProteinID:
AJF62340
LinkDB
All DBs
Position
complement(143454..144380)
Genome browser
AA seq
308 aa
AA seq
DB search
MHQYIKKCPECGGIHLVLNKEKGEMICRDCGLVIEEKMIDFGQEWREFDPEQADKRRRTG
APSTWTKFDRGLGTDVGQKGDIYQLKSKERNKFFRLRKWQHRISTAIERNLKLALAELKR
VSSYLKLPASVEEEAARVYTLAVQRGLVRGRSMESVVAGALYAACRRHEVPRTLDELSEA
SGIDKKEIGRTYRFITRELGIRILPSNPVDYIPRFASALKLNAETQSKAVEILEKAQKEE
LTSGRGPTGIAAASLYVAALINNEKRTQREVADVAGVTEVTIRNRYKELLRELDLKDEIK
KKFLDEEE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaatacataaaaaaatgccctgagtgtggcggaattcatttagttcttaataaa
gaaaagggtgaaatgatatgtagggactgcggtttagttattgaggaaaagatgattgac
ttcggccaggaatggagagaatttgatcctgaacaggctgataaacgtagaagaacaggt
gctcccagtacatggaccaaatttgaccgcggattaggaacagatgtaggccaaaaaggt
gatatttaccaattaaagagcaaagaaagaaacaaattttttagattaagaaagtggcag
cacagaataagtactgcaattgaaagaaatttaaaattagccctggctgaattaaaaaga
gtttcttcatatttaaaattgccagcatctgtagaagaggaagctgcaagagtttatact
ttagctgttcaaagaggtctggttcgtggaagatctatggaaagtgttgttgcgggtgca
ttatatgctgcctgtagacgtcatgaagttccaagaacattagacgagttaagtgaagca
agcggtattgacaaaaaagaaatcggaagaacttacagatttattacaagggaattggga
attagaattcttcctagtaatccagtcgattatattccaagatttgcttcagcattgaaa
ttaaatgcagaaactcaaagcaaggctgttgaaattcttgaaaaagctcagaaagaagaa
ttaacctcaggaagaggacctacaggaattgcagccgcttcattatatgttgctgcttta
atcaacaatgagaaaagaacccaacgtgaggtagcagacgttgcaggagttacagaagtt
acaatcagaaaccgttataaggaattgcttcgcgaattagatttgaaagacgaaattaag
aagaaattcttagacgaggaagaataa
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