Archaeon GW2011_AR20: QT11_C0001G0329
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Entry
QT11_C0001G0329 CDS
T03843
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
arg
Archaeon GW2011_AR20
Pathway
arg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
arg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
QT11_C0001G0329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arg03019
]
QT11_C0001G0329
03009 Ribosome biogenesis [BR:
arg03009
]
QT11_C0001G0329
04131 Membrane trafficking [BR:
arg04131
]
QT11_C0001G0329
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arg04147
]
QT11_C0001G0329
Messenger RNA biogenesis [BR:
arg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
QT11_C0001G0329
Ribosome biogenesis [BR:
arg03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
QT11_C0001G0329
Membrane trafficking [BR:
arg04131
]
SNARE
SNARE associated proteins
Others
QT11_C0001G0329
Autophagy
Aggrephagy
Other aggrephagy associated proteins
QT11_C0001G0329
Exosome [BR:
arg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
QT11_C0001G0329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_14
AAA_22
AAA_5
AAA_33
AAA_lid_PRS2_C
CDC48_2
NPHP3_N
ABC_tran
nSTAND3
TIP49
Sigma54_activat
AAA_28
SLFN-g3_helicase
Parvo_NS1
AAA_7
RNA_helicase
Mg_chelatase
AAA_24
IstB_IS21
Zeta_toxin
AAA_17
ResIII
DUF815
ATPase
AAA_18
Sigma54_activ_2
NB-ARC
Mistic
TsaE
Vps4_C
Bac_DnaA
AAA_3
AAA_11
PhoH
Viral_helicase1
AAA_30
NACHT
Asp_decarbox
Ago_Mid
Motif
Other DBs
NCBI-ProteinID:
AJF62478
UniProt:
A0A0B5HYT6
LinkDB
All DBs
Position
261739..264024
Genome browser
AA seq
761 aa
AA seq
DB search
MKDPKDVKLKVMEALQEEAYKGIVRIDSETMHLIGVHPGDVVQITGGRETVAIVDRAYPT
DVGQNVIRMDGIMRRNAKTSIGEFITVKKAEVKEAKDVVIAPAQKGVMVKADPRIFKKAL
LGRAVVKGDIVAPGGTRTRHRTMSESPFFEEVFSMFEESFTAGFGLAGLRFIIANTNPKT
PVIITENTELTLNPKAVEVSEEKVPEVTYEDIGGLKEEISKIREMVELPLKHPNLFSKLG
IEPPKGVLLHGPPGTGKTLLAKAVANESEANFILVNGPEIMNKFYGESEKRIRDIFEEAE
KNAPSIIFIDEIDAIAPKRDESYGELERRLVSQLLTMMDGLKGRGKVVVIGATNRPNAVD
PALRRPGRFDREISIGVPNKLGRLNILKIHTRNMPLAKDVNLNRLAEITHGFVGADVAAL
SREAAMSVLRRILPEIKLGEKEDIPDEILQKLTVTDLDFREALKLVRPSAMREVLIETPN
IHWEDIGGLEQVKQELKEAVEWPLKHQDSFKRLGIKPPKGLLLYGPPGTGKTLLAKAVAN
ESEANFILVNGPELLNKWVGESSRGIRKIFEKARQASPCIIFFDEIDSIAARRGTEYGNK
TIDQMVNTLLAEIDGLQELNDVVVVAATNRPDIIDPGLLRPGRFDRLVLIPPPNKQARLD
ILNIHTKNMPLAKDVNLGEIAKATEGFVGADLESVCREAGLLALREDMKVKEVGKKHFET
AIKKVNPSVSPDLMDKYKELEENYLRNARAGLTKEVPNYFG
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacccaaaagatgttaaactaaaagtaatggaagcattgcaggaagaagcttac
aaaggaattgtaagaattgattcagagacaatgcatttaattggagttcatccaggagat
gttgtccagattacaggcggaagagaaacagttgctattgtagatcgggcttatcctaca
gatgttggacaaaatgttataagaatggatggaataatgagaagaaatgcaaaaacttct
ataggcgaatttattacagtcaagaaagcagaagtaaaagaagctaaagatgttgtcata
gcacccgcgcaaaaaggagttatggtaaaagcagatcccaggattttcaagaaggcttta
ctaggaagggcagttgttaaaggagatattgttgcacccggcggaacaagaacaaggcac
aggacaatgtctgaatccccattttttgaagaagtattcagcatgtttgaagaaagtttt
acagcaggtttcggactggctggattaagatttataattgcaaatacaaatccaaaaaca
cctgtaataattacagaaaatactgaattaacattaaatcccaaggcagtcgaggtttca
gaggagaaagtcccagaagttacttatgaagacatcggcggattaaaggaagagatatca
aagataagagaaatggtcgagttgccattgaaacatccgaatttattttctaaattagga
attgagcctcctaagggggttttattacacgggccgccaggaacaggaaaaactttattg
gctaaggcagttgcaaatgaaagtgaagctaactttattttagtcaatgggccagagatt
atgaataaattttacggcgaatccgaaaaacgcatcagagatatatttgaagaagctgag
aaaaacgcaccaagcataatttttattgatgaaatagatgcaattgctccaaaaagagac
gaaagttatggagaattagaaagaagacttgtttcccaattgttaactatgatggatggc
ttaaagggaagaggaaaggttgttgttattggtgctactaacaggccaaatgcagttgac
cccgccttaagacgcccaggaagatttgacagggaaatatcaattggcgttccaaataaa
ttaggaaggttaaatattttaaaaatacatacaagaaatatgcccttggcaaaggatgtt
aatttaaatagattagctgagattacccatggatttgttggagcagatgttgctgcatta
tcaagagaagctgcaatgagtgttttaagaaggattttgccagagattaaattaggagaa
aaagaagatattccagatgagatattgcaaaaattgacagtaactgatttggattttagg
gaagctttgaaattagtaaggccaagtgctatgagggaagttttaatagaaacaccaaac
atacactgggaagacatcggcggattagaacaggttaaacaggaattaaaagaagctgta
gaatggccgttaaaacatcaggattcatttaaaagattgggaattaagcctccaaaagga
ttattattatatgggccgccaggaacaggaaaaactttattggctaaggcagttgcaaat
gaaagtgaagctaactttattttagtcaatgggccagaattattaaacaaatgggttgga
gaaagttcaaggggaataagaaagatatttgaaaaagcaaggcaggcatccccatgcatt
attttctttgatgagattgattcgatagctgcaagacgcggtacagaatatggaaataaa
acaattgaccaaatggttaatacattattggctgaaatagacgggttgcaggaattaaac
gatgttgttgtagttgccgcaacaaataggccagatattattgatccggggttattaagg
cctgggagatttgacagattagttctaataccccccccaaacaagcaggcaagacttgat
attttgaatattcacacgaaaaacatgcctttggcgaaagatgttaatctaggagagata
gccaaagcaacagaaggttttgtcggagcagatcttgagtcagtatgcagggaagctgga
ttgcttgctttaagagaagacatgaaagttaaggaagttggcaaaaaacatttcgaaact
gcaattaaaaaagttaatccgagtgtttcgcctgatttgatggacaaatacaaagaatta
gaggaaaattatcttagaaatgccagggcaggcttgacgaaggaagtcccgaattatttt
ggctaa
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