KEGG   Archaeon GW2011_AR20: QT11_C0001G0926
Entry
QT11_C0001G0926   CDS       T03843                                 
Name
(GenBank) DNA-directed RNA polymerase subunit A''
  KO
K03042  DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
Organism
arg  Archaeon GW2011_AR20
Pathway
arg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:arg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    QT11_C0001G0926
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:arg03021]
    QT11_C0001G0926
Enzymes [BR:arg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     QT11_C0001G0926
Transcription machinery [BR:arg03021]
 Prokaryotic type
  Archaeal type
   RNA polymerase
    Core subunits
     QT11_C0001G0926
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 Intein_splicing LAGLIDADG_3
Other DBs
NCBI-ProteinID: AJF63054
LinkDB
Position
complement(736824..739406)
AA seq 860 aa
MSDQEIPKKLLDEAIELSKEHRLGDQKRKEILKRVKEEYESARITPGESIGIITAESFGE
PGTQMSAHFSEKIIFKINNEIKIIEIGKFIDGLINSKGSLKLNEYSEILPLNDLEIFVPS
LNQEEKIEWKKVIEASRHKPQKKLMNIKTASGREIICTDNHSFVTRINNSVIPVKGTELG
LGMRIPVINNFFNDSYLSEIKINKNIFDDLIVVNEDGLLSKPGTIAKPIKNSVNLNQNTG
WFIGAYLAEESANYGQVSISNLDNNYINNAKIFVDEIKLDYTEDFHNRGFALSRDLKINS
TLLASFIRNSCSSGSDFKKVPEFAYNASNEFISGLLRGYFDGDANFHVDRKMIRVSSNSR
ELIDGIALLLSRFKIFSYKIKDKKQQYWLLIPYKYAPQFLQHIGSDIEYKRKDLEKLAEL
AKNFWNKKSQDYTDMISGFGNLFHDVSKKLNYPTRYINNFAKRQKIGRTALFRYIKKFEN
LAKEKNVDIKNELNIMRRMFNSDVIWDEIVSIGHVDYDYDYVYDLSVSGLETFTTFDGII
THNTLNVFHFAGVAEMGVTLGLPRLIELFDARKDPSTPRTEIYLKRGFTKDKEKVKEIAA
KLVETRLHDIATEFSLNLTLFRVEVTLDRKKMRDLKITEAQLEKTVEEQLKKVKVSFAQD
KLIIKQKAEEEYELRMLYQLKEKSKDVHVKGIKGIIQVSPIFNGNEFVILCAGANLKDVL
KTEDIDETRTTTNDIFMMADVLGIEAARQAIINEATNVIKQQGLDIDIRHIMFLADAMTN
SGKIRGITRSGITAEKESVLARASFETPLKHIVNASLIGEEDHLNSVIENVMVNQVVPLG
TGLPDLIAKMRQKVKEAKEK
NT seq 2583 nt   +upstreamnt  +downstreamnt
atgtctgatcaagagattcctaaaaaattattggacgaagcaattgaacttagcaaggag
cacaggcttggggatcaaaaaagaaaagaaattctgaaaagggttaaggaagaatatgaa
agcgccaggataactcccggagaaagcataggaataatcactgcagaaagttttggtgaa
ccaggtacccaaatgtcggcccatttttccgagaaaataatatttaaaataaataatgaa
attaaaattattgaaattggtaaatttatcgacggtttaattaattcaaaaggttcttta
aagttaaatgaatattccgaaatcctcccattaaatgatcttgaaatttttgttccaagt
ctaaatcaagaagaaaaaattgaatggaaaaaggttatcgaagcaagcagacataaacca
caaaaaaagttaatgaatataaaaacagcttcgggaagagaaattatatgcacagataat
cattcgtttgtaactagaattaataattctgtaattccagtaaagggaacagaattagga
ttaggaatgagaattccggtaattaataatttctttaatgactcatatttaagtgagata
aaaataaataaaaatatttttgatgatttgattgttgtaaatgaagatggtttattatca
aaaccaggaacaattgctaaaccaatcaaaaactctgtaaacctcaaccaaaatacaggt
tggtttattggtgcttatttagcagaggaatccgcgaactacggtcaagtttcaatatca
aatttagataataattatattaacaatgcaaagatttttgttgatgagataaaattagat
tacactgaagattttcataataggggatttgctttaagcagagatttaaagataaattct
actttattagcaagttttataagaaactcatgcagttctggatcagattttaaaaaagtt
cctgaatttgcttataatgcaagtaatgaatttatttctggattattaagaggatacttt
gatggtgatgcaaatttccatgttgatagaaaaatgattagggtaagttcaaattcaaga
gaattaattgatgggattgctttattgttaagcagatttaaaatattttcatataagata
aaagataaaaaacaacaatattggttattaataccatataaatatgccccccaattcctg
cagcatatcggttcagatatcgaatataaaagaaaggatttagaaaaattagcagagttg
gcaaaaaatttctggaataaaaaatctcaagattatacagacatgatttcggggtttgga
aatttatttcatgatgtatcaaaaaaattaaattatccgacgagatatataaataatttc
gcaaaaagacaaaaaataggaagaacagctttatttagatatataaagaaattcgagaat
ttagcaaaagaaaaaaatgttgatattaaaaatgaattaaatataatgcgcagaatgttt
aactctgatgttatttgggatgaaatcgttagtatagggcatgttgattatgattatgat
tatgtttatgatttaagcgtttcaggattagagacgtttacaacatttgatggaattatt
acgcataatacattaaacgttttccattttgcaggtgttgcagaaatgggggtaactttg
ggattgccaaggttaattgaattatttgatgcaagaaaagatccgagcactccaagaacg
gaaatttacttgaaaagaggatttacaaaagacaaggaaaaagtcaaggaaatagctgca
aaattagtcgagacaagattgcatgatattgcaaccgaattcagcctgaatttaacatta
tttagggtagaagttacattagacagaaaaaaaatgagggatttgaaaattacagaagcc
caattagaaaaaaccgttgaagagcagttaaaaaaagtcaaggtcagctttgcgcaggac
aaattaattatcaagcagaaagcagaggaagaatatgaactaagaatgttgtatcagcta
aaggaaaaatcaaaagacgtgcatgtcaagggaattaagggaataatccaggtttccccg
atatttaacggaaatgaatttgtcatattatgcgcaggagcaaatttgaaagatgttctt
aagacagaagatattgatgaaacaagaacaacaacaaacgatatttttatgatggcggat
gttttgggaatagaagctgcgagacaggcgataatcaacgaagctacgaatgttattaag
cagcaaggtttagatattgacataaggcacataatgttcctggcagatgcaatgacaaac
tccgggaaaatccgcgggataacaagatcgggaataactgcagagaaagaaagtgttctg
gcaagggcaagtttcgaaacgcctttaaagcatattgtcaatgcttccttaatcggagaa
gaggatcacctaaactctgtcatcgaaaatgtaatggttaatcaggttgttcctcttgga
actggtttgcctgatttaatagcgaagatgaggcagaaagtaaaggaagctaaggaaaaa
taa

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