Arthrobacter sp. Hiyo8: AHiyo8_22300
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Entry
AHiyo8_22300 CDS
T04181
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
arh
Arthrobacter sp. Hiyo8
Pathway
arh03420
Nucleotide excision repair
arh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AHiyo8_22300
03430 Mismatch repair
AHiyo8_22300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arh03400
]
AHiyo8_22300
Enzymes [BR:
arh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AHiyo8_22300
DNA repair and recombination proteins [BR:
arh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AHiyo8_22300
MMR (mismatch excision repair)
Other MMR factors
AHiyo8_22300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
AAA_11
Viral_helicase1
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
BAS13927
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Position
complement(1577392..1578999)
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AA seq
535 aa
AA seq
DB search
MNPQQEEAVKHAGSPLLIVAGAGSGKTRVLSNRIAYLIATRRAHHGEILAITFTNKAAAE
MRERIEALVGARAKSMWISTFHSSCVRILRREATNVGLNSNFSIYDSADSLRLITLVAKN
LDLDPKKFAPKAIQHKISALKNELIDDDAFASSANYNEPFEQAVAEVFKGYTQRLRQANA
MDFDDLIAQTVYMFRAFPALAESYRRRFRHVLVDEYQDTNHAQYALVREIVGEGPQASEL
TVVGDSDQSIYAFRGADIRNIVEFEKDYPEARTIKLEQNYRSTQNILSAANSVISRNPNR
PDKKLWTAEGDGEKIIGYVGENEHDEAQFIAKEIDRLQDEEGLRPGDVAIFYRTNAQSRS
IEDVLVRVGLPYKVVGGTRFYERKEIKDALAYLRVLVNPDDDVNLRRVLNEPKRGIGDRA
EGAVAALAERERTSFMTAARKADQAPGMATRSVNAVLGFVKLLDDLAEVASGSGAAAALE
AVLEQTGYLAGSAPAPIRRTNPAWKTSPNSWRWCGNTSATTPKAHWVNSWSKSPS
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
ttgaacccccagcaggaggaagccgtcaaacatgccggcagccctttgctgatcgtggcc
ggggccggttcgggcaaaacccgcgtgctgtcgaaccgcattgcgtacctgatcgccacc
aggcgggcccatcacggcgagatcctggctatcaccttcaccaacaaggcggccgcggaa
atgcgggaacgcatcgaagccctggtgggtgcccgtgccaagtccatgtggatctcgacg
ttccactcctcctgcgtgcgtatcctgcgccgtgaagctaccaacgtggggctgaactcc
aacttctccatctacgattccgcagactccttgcggctcatcacgctcgtagcgaagaac
ctggacctcgatcccaaaaagttcgcgcccaaagcgatccagcacaagatctcggccctc
aagaacgagctcatcgacgacgatgcgttcgcctcgagcgccaactacaacgaacccttc
gaacaagccgtggccgaggtcttcaagggctatacccagcgcttacgccaggccaacgcc
atggacttcgacgacctcattgcgcagaccgtctacatgttccgggccttccccgcgctc
gcggagtcctaccgccgtcgattccgccacgtcctcgtggacgaataccaggacaccaac
cacgcacagtacgcattggtccgcgaaatcgtcggtgagggtccccaggcgagcgagctg
accgtcgtcggcgactccgaccaatccatctacgcgttccgcggtgcggacatccgcaac
atcgtcgaattcgagaaggactacccggaagcccgcaccatcaagttggagcagaactac
cgctccacccagaacatcctgagcgcggcgaactccgttatttcgcgcaaccccaaccgc
ccggacaagaaactctggacggccgagggcgacggcgagaagatcatcggctacgtaggc
gagaacgagcacgacgaagcccagttcatcgccaaggagattgaccggctccaggacgag
gaaggcctgcgtcccggcgacgtcgccattttctaccgcaccaacgcccagtcccgctcc
attgaagacgtcctggtccgcgtcggactgccgtacaaagtggtgggcggcacccgcttc
tacgagcgcaaggaaatcaaggacgccctcgcgtaccttcgcgtcctggtgaacccggac
gacgacgtcaatttgcgtcgcgtcctcaacgaacccaagcggggaatcggtgatcgtgcc
gaaggcgccgtcgcggcgctcgccgagcgcgaacgcacgtcgttcatgactgcggcgcgc
aaggcggaccaggctcccggcatggccacccgctccgtgaatgcggtcctaggctttgtg
aaactcctggatgacctggccgaagtggcttcgggttccggggctgcggcagctttggaa
gcagtactggaacagaccgggtaccttgccggctccgcgccagcaccgatccgcaggacg
aatcccgcgtggaaaacctcgccgaactcgtggcggtggtgcgggaatacgagcgcgaca
accccgaaggctcactgggtgaattcctggagcaagtctccctcgtag
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