Arthrobacter sp. Hiyo8: AHiyo8_60410
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Entry
AHiyo8_60410 CDS
T04181
Name
(GenBank) uncharacterized formamidopyrimidine-DNA glycosylase-like protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
arh
Arthrobacter sp. Hiyo8
Pathway
arh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
arh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AHiyo8_60410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arh03400
]
AHiyo8_60410
Enzymes [BR:
arh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AHiyo8_60410
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AHiyo8_60410
DNA repair and recombination proteins [BR:
arh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AHiyo8_60410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
BAS17738
UniProt:
A0A0K2RSE1
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All DBs
Position
complement(4320359..4321075)
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AA seq
238 aa
AA seq
DB search
MERFGKFVSLDAEGIHFIFHLAKAGWLRYTEQPSQTQLRMGGSNIAARIGFTKSDGSTHV
GVDLTEAGTKKSLAVYVVRRPLDVPGIATLGPDPLSPAFTEETLAGILSTNAHQIKGVLR
SQGVIAGIGNAYSDEILHAARISPFAIAKSLDKDTTRVLYESIESVLGAAVAAAVGKASS
ELKDTKRNTMRVHGRAASLAPRAGPRSARCPLPTRHCSIALAARQTERSSQTVERRGS
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
gtggaacgcttcggaaagttcgtcagcctcgacgccgaaggcatccatttcatcttccac
ctcgccaaggccgggtggctccgctacacggagcagccgtcgcaaacccagcttcggatg
ggcggcagcaatattgcggcaaggattggcttcaccaagagcgacggttcaacccacgtc
ggagtggacctgacggaggccgggacgaagaaaagcctggccgtatacgtggtgcgcagg
cccctggacgttccgggaatagcgacgcttggcccggacccgctgagcccggccttcacg
gaggagaccttggccggaatcctttccacaaacgcgcaccagatcaagggagtccttcgg
agccaaggcgtcatcgcgggcatcgggaacgcctacagcgacgagatccttcacgcagcc
aggatttcaccgttcgcgatcgccaagtcgctggacaaggacaccacccgtgtcctctat
gagtccatcgaaagcgtcctgggtgcggctgtggccgccgccgtcgggaaagcgtcaagc
gaactcaaggacaccaaacggaacaccatgcgggtccacggcagggcggccagccttgcc
ccgcgtgcgggaccacgatccgcgaggtgtcctttgccgacacgtcattgcagtattgcc
ctggctgccagacaaacggaaagatcctcgcagaccgtcgaacgtcgcggttcctga
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