Amycolatopsis rhabdoformis: VSH64_00795
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Entry
VSH64_00795 CDS
T09694
Name
(GenBank) polyprenyl synthetase family protein
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00900
Terpenoid backbone biosynthesis
arhd01100
Metabolic pathways
arhd01110
Biosynthesis of secondary metabolites
Module
arhd_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
VSH64_00795
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
VSH64_00795
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
arhd01006
]
VSH64_00795
Enzymes [BR:
arhd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
VSH64_00795
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
VSH64_00795
2.5.1.29 geranylgeranyl diphosphate synthase
VSH64_00795
Prenyltransferases [BR:
arhd01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
VSH64_00795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WSE30682
LinkDB
All DBs
Position
complement(166215..167306)
Genome browser
AA seq
363 aa
AA seq
DB search
MDAPGFDDDLPAHVERALTAFLGRAGDEIVRTEPTVAAGIDVLSGFVLCGGKRIRPTFAW
WGWRGAGGAASGEAAEGALQVVASLELIQACALIHDDLIDSSDSRRGNPTVHVASAKVHA
DHGWLGSPATFGLATAVLVGDLALAWADDMFAEAPLPAETLAKARPAWRAMRTEVLAGQY
LDVRTQAVGDASPEAALRIDRLKTAAYTVQRPLHLGAALAGADDRLVTTLLEFGGDVGVA
FQLRDDLLGVFGDPSVTGKPAGDDLREGKRTLLVALGLQLADERGDRAAAKVIAGAIGKA
DLSDTAVDAVREALTGVGAVDAVEHRIDQLTASAMAALDRAHLAEPAPAALADLVGKATR
RTS
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcccggtttcgacgacgatctgcctgcccacgtcgagcgtgcgctgaccgcg
ttcctcggccgtgcgggcgacgagatcgtgcgcacggagccgacggtcgcggcgggcatc
gacgtgctgtccggcttcgtgctgtgcggtggcaagcgcatccggcccacgttcgcgtgg
tggggctggcgcggcgccggcggagcggcgtccggcgaggcggccgagggcgcgctgcag
gtcgtggcgagcctcgagctgatccaggcgtgcgcgctgatccacgacgacctcatcgac
tcctccgactcccgccgcggcaacccgaccgtgcacgtggcctcggccaaggtgcacgcc
gaccacggctggctcggctcgcccgccacgttcgggctggccacggccgtgctggtcggc
gacctggcgctcgcgtgggccgacgacatgttcgccgaggccccgctgccggccgagacg
ctcgcgaaagcgcgcccggcctggcgcgcgatgcgcacggaggtgctcgccgggcagtac
ctcgacgtgcgcacgcaggccgtcggcgacgcctcgcccgaggccgcgctgcgcatcgac
cggctgaagacggccgcctacaccgtgcagcgcccgctgcacctcggcgccgcgctggcc
ggcgccgacgaccggctcgtgacgacgctgctggagttcggcggtgacgtcggcgtggcg
ttccagctgcgcgacgacctgctcggcgtgttcggcgacccgtcggtgaccggcaagccc
gccggcgacgacctgcgcgagggcaagcgcaccctgctcgtggccctgggcctgcagctg
gccgacgaacgcggcgaccgcgcggcggcgaaggtgatcgccggcgcgatcggcaaggcc
gacctgtccgacacggccgtcgacgccgtgcgcgaagccctgaccggcgtcggcgcggtc
gacgccgtggagcaccgcatcgaccagctcaccgcctcggcgatggccgcgctcgaccgc
gcgcacctggccgagccggctccggccgcgctggccgacctggtcggcaaggcgacccgg
cggacgtcgtga
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