Amycolatopsis rhabdoformis: VSH64_01660
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Entry
VSH64_01660 CDS
T09694
Name
(GenBank) DEAD/DEAH box helicase
Organism
arhd
Amycolatopsis rhabdoformis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
WSE30845
LinkDB
All DBs
Position
360269..363019
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AA seq
916 aa
AA seq
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MLSVEFGAQTQATYLPSDPPREGVLALWGDGVAGDTAIELVLPGGGKFARTKVDARLVPL
ARVIPRLLVVPDEVSPAIAAWSAVVNAGVNLVARGRLRPALTPGGVDSWRVGPLDGADEE
LLRGLASALPPEAHALPLSGVKRIRLHSPESLVRALWDAAADVLVRSPAAAVGAGGPGFA
QAEPTLVGPDGVAWLGELEARGPHGAQLILRVEAGADEQFAGVLAVRSALEPSLVVEAET
LWDAPDAVLQRLGDQVETQLLLGLRRGARAWPPLGRVLAEAAPTRFALSDDDVVDLLGAG
GRELGGAGIEVLWPKDLFAGEVRAKASATQAPGSEAGPAFPLTGLLEFRWRLSLGGAELS
DEEVATLAEAKRPLVRLRGQWVKLDPSLLARMRAKRNRKLTGAEALAAALTGELELDGET
VEFAAQPALAGLVERLRERDPEPIGPPAGLTATLRPYQLAGLGWLATMTGLGLGACLADD
MGLGKTIQLIALHLHRRALGAGPTLVVCPTSLLGNWEREFAKFAPEVRVRRFHGGSRHLD
DLLPDEVVLATYGVVRRDRTTLSEVDWGLVAADEAQHVKNPLSATAKELRKVPAVARVAL
TGTPVENRLTELWSLMDWTTPGLLGPLDRFRRTVARPIERDRDKGATERLATTVRPFLLR
RKKTDPDIAPELPRKTETDRFVPLTAEQITLYEAVVRENLAEIRESQGVQRRGQVLKLLT
ELKQICNHPAQFLKEPGGVLSGRSGKLAAFDELLDVILDEGDSVLVFSQYVQLCRLLERR
LADRGLPTALLSGEVGPKRRDELVASFQAGEVPVFLLSLKAGGVGLNLTRATHVIHYDRW
WNPAVEDQATDRAYRIGQDRPVQVHRLIAEGTLEERIAAVLESKRGLAEAVVGAGEDWIT
ELSDDQLADLVRLGGG
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
gtgctgagcgtggagttcggcgcgcagacccaggcgacctaccttccctcggatccgccg
cgggagggtgtgctggcgttgtggggcgacggggtcgcgggcgacaccgcgatcgagctc
gtgctgcccggcggcgggaagttcgcgcgcaccaaggtcgacgcgcggctggtcccgctg
gcgcgggtgattccgcggctgctggtggtgcccgacgaggtgagcccggcgatcgcggcg
tggtcggcggtcgtcaacgccggggtgaacctcgtggcgcgcgggcggttgcggccggcg
ctgacccccggcggcgtcgacagctggcgcgtggggccgctcgacggggccgacgaggag
ctgctgcggggcctcgcgtcggcgttgccgccggaggcgcacgcgttgccgctgtccggc
gtgaagcggatcaggttgcattcgccggagtcgctggtgcgtgcgttgtgggacgcggcg
gccgacgtgctggtgcgcagtcccgcggcggccgtcggagcgggtgggccggggttcgcg
caggcggagcccacgctggtcgggcccgacggggtggcgtggctcggtgagctggaggct
cgcgggccccacggtgcgcagctgatcctgcgggtcgaagcgggtgcggacgagcagttc
gcgggggtgctggccgtgcggtcggcgctggagccgagcctcgtcgtggaagcggagacg
ctgtgggacgcgcccgacgcggtgctgcagcgcctcggcgaccaggtcgagacgcagctg
ctcctgggcctgcgccgcggggctcgggcgtggccgccgctcgggcgcgtgctcgccgag
gcggcgccgacgaggttcgcgctgtccgacgacgacgtggtcgacctgctcggtgccggc
ggccgtgagctgggcggcgccggcatcgaagtgttgtggcccaaggatctcttcgccggt
gaagtccgcgccaaggcgagtgccacgcaggcgccgggcagcgaagccggcccggcgttc
ccgttgacgggcctgctcgagttccgctggcgcctgtccctcggcggcgccgagctcagc
gacgaagaagtggccacgctcgccgaggccaagcgcccgctcgtgcgcctgcgcggccag
tgggtgaagctcgacccgagcctgctcgcccgcatgcgcgccaaacgcaaccggaagctc
accggcgccgaagcgctggccgcggcgctcacgggggagctcgaactcgacggggaaacg
gtcgagttcgccgcgcagcccgcgctcgccgggctggtcgagcggctccgggagcgtgat
cccgagccgatcgggccgccggccgggctcacggcgacgctgcgcccgtaccagctcgcc
ggcctcggctggctcgccacgatgacgggcctgggcctcggcgcgtgcctcgccgacgac
atgggcctgggcaagaccatccagctcatcgcgctgcacctgcaccgccgcgcgctcggc
gccgggcctacgctggtggtctgccccacgtcgctgctcggcaactgggagcgcgagttc
gcgaagttcgcaccggaggtgcgcgtgcgccgcttccacggcggcagccggcacctcgac
gacctgctgcccgacgaggtcgtgctcgccacctatggcgtggtccgccgcgaccgcacc
acactgtccgaagtggactggggtcttgtggccgccgacgaggcccagcacgtgaagaac
ccgttgtccgccacggcgaaagagctgcgcaaggtgccggccgtcgcgcgcgtggcgctc
accggcacgccggtggaaaaccggctcaccgagctgtggtcgctcatggactggaccacg
ccgggtctgctcggcccgctcgaccgcttccgtcgcaccgtcgcgcggcccatcgagcgc
gaccgcgacaagggcgccaccgagcgcctggccaccaccgtgcgcccctttctgctgcgg
cgcaagaaaaccgatccggacatcgcgcccgagctgccgcgcaagaccgagaccgaccgg
ttcgtgccgctcacggccgagcagatcacgctgtacgaggcggtggtgcgcgagaacctg
gccgagatccgcgagtcgcagggggtgcagcggcgcgggcaggtgctgaagctgctcacc
gagctcaagcagatctgcaaccaccccgcgcagttcctcaaggagcccggcggagtcctc
agtggacgctcgggcaagctcgccgcgttcgacgagctgctcgacgtgatcctcgacgag
ggcgacagcgtgctcgtgttcagccagtacgtgcagctgtgccgcctgctcgaacgccgc
ctggccgaccgcggcctgcccaccgcgttgctgtcgggcgaggtcgggccgaagcggcgc
gacgagctggtggcgtcgttccaggcgggtgaggtgccggtgttcctgttgtcgctcaag
gcgggcggcgtcgggctcaacctcacgcgggccacgcacgtgatccactacgaccgctgg
tggaacccggccgtggaggaccaggcgaccgaccgcgcgtaccggatcgggcaggaccgg
ccggtgcaggtccaccgcctcatcgccgagggcacgctggaagagcgcatcgccgcggtg
ctcgagtcgaagcgcgggctggccgaggccgtggtgggcgcgggggaggactggatcacc
gagctgtccgacgaccagctcgccgacctggtccggctcggcggtggctga
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