KEGG   Amycolatopsis rhabdoformis: VSH64_02545
Entry
VSH64_02545       CDS       T09694                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
arhd  Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:arhd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:arhd03016]
    VSH64_02545
Enzymes [BR:arhd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     VSH64_02545
Transfer RNA biogenesis [BR:arhd03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    VSH64_02545
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: WSE31009
LinkDB
Position
complement(547315..548580)
AA seq 421 aa
MGSAQADGARTGETTTEDAGSPVLLREPAEGTPPVVVDAAELAEACARLAAGTGAVAVDT
ERASGYRYWPKAYLVQLRREGSGTVLIDPIALADDLAPLREVLNDTEWVLHAASQDLPCL
AELDLHPKSLFDTELAGRLAGYERVALGTLVELLLGFTLEKGHSAADWSKRPLPVDWLNY
AALDVELLNELRAKLEVELEAQGKLEWARQEFENVRTAPPPAPRAEPWRRTSGVHKIRNP
RGLAAVRELWQARDELARKRDRAPSRILPDSAIVNAVTSDPKTVEELQALPVFSGRVQRK
YTASWLRHLQAAKALPASELPSPTQPSDGPPPVNRWADKDPDAAARLAAARTALAAIAED
RRLPVENLMLPDLVRRTCWRPPADLSEDGVAEVLRAGGARPWQVELTVGALSKALHTTAA
A
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgggaagtgcacaggcggacggcgcccggaccggagagaccaccaccgaggacgccgga
tcgcccgtgctgctacgcgagcccgccgaaggcacaccccccgtggtggtcgacgcggcg
gagctcgccgaggcgtgcgcgcggctcgccgcgggaaccggcgccgtggccgtggacacc
gaacgggcgtccggctaccgctactggcccaaggcctacctcgtgcagctgcgccgcgaa
ggctccggcacggtgctgatcgacccgatcgcactggccgacgacctcgcccccctgcgg
gaagtcctcaacgacaccgagtgggtgctccacgccgccagccaggacctgccgtgcctg
gccgagctggacctgcacccgaagtccctcttcgacaccgagctggccggccggctggcg
ggctacgagcgcgtggccctgggcacgctggtcgagctgctgctcggcttcacgctcgag
aagggccacagcgcggccgactggtcgaagcggccgctgcccgtcgactggctcaactac
gccgccctcgacgtcgaactcctcaacgaactgcgcgccaagctcgaggtcgagctggag
gcgcagggcaagctcgagtgggcgcgccaggagttcgagaacgtccgcaccgctcccccg
cccgccccgcgcgccgagccgtggcgccgcacgtcgggcgtgcacaagatccgcaacccg
cgcggcctcgccgccgtgcgcgagctgtggcaggcccgcgacgaactggcccgcaaacgc
gaccgcgcgcccagccgcatcctgccggacagcgccatcgtcaacgcggtgacttcggat
ccgaaaaccgtcgaggagctgcaggccctgccggtgttcagcggccgcgtgcagcgcaag
tacacggccagctggctgcggcacctgcaggcggccaaggcgctgcccgcaagcgagctc
cccagcccgacccagccttccgacggccctcccccggtgaaccgctgggcggacaaggac
ccggacgcggctgctcgtctggctgccgcgcgcacagctctggcggcgatcgcggaagac
cgccggttgccggtggagaacctgatgctgccggacctcgtgcggcggacgtgctggcgg
ccgccggcggatctgtcggaggacggggtggccgaggtgctgcgcgctggtggggctcgg
ccgtggcaggtggagctgacggtgggggcgttgagcaaggctctgcacacgacggctgct
gcctga

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