Amycolatopsis rhabdoformis: VSH64_03080
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Entry
VSH64_03080 CDS
T09694
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00220
Arginine biosynthesis
arhd00240
Pyrimidine metabolism
arhd00250
Alanine, aspartate and glutamate metabolism
arhd01100
Metabolic pathways
arhd01110
Biosynthesis of secondary metabolites
arhd01240
Biosynthesis of cofactors
Module
arhd_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VSH64_03080 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VSH64_03080 (carB)
00220 Arginine biosynthesis
VSH64_03080 (carB)
Enzymes [BR:
arhd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
VSH64_03080 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
MGS
CPSase_L_D3
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_2
ATP-grasp_5
ATP-grasp_3
GARS_A
ATP-grasp_4
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
WSE31107
UniProt:
A0ABZ1I9L2
LinkDB
All DBs
Position
654307..657621
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AA seq
1104 aa
AA seq
DB search
MPKRTDIQHVLVIGSGPIVIGQAAEFDYSGTQACRVLRAEGLRVSLVNSNPATIMTDPEF
ADATYIEPVTPDFVEKVIAQERPDAILATLGGQTALNCAVALHERGVLEKYGVELIGADI
DAIQRGEDRQKFKDIVRTIGAEVPRSRVCNTMEDVRATVAELGLPVVIRPSFTMGGLGSG
LAYTPEELERLASTGLSESPVTEVLIEESVLGWKEYELELMRDRHDNVVVVCSIENVDAM
GVHTGDSVTVAPTMTLTDREYQVMRDVGIAVLREVGVDTGGCNIQFAINPEDGRMVVIEM
NPRVSRSSALASKATGFPIAKIAAKLAIGYTLDEIQNDITGETPAAFEPTLDYVVVKIPR
FAFEKFPGADPTLTTTMKSVGEAMSFGRSFPEALGKAMRSIETKATGFWTLPDPEGVTME
STLDSLRVPHEGRLYEVERALRLGATVAQVHDASGIDPWFIDQIALIGEVGAEVRDAPVL
DGELLRRAKRTGLSDRQIAALRPELAGEDGVRSLRHRLGVRPVFKTVDTCAAEFKADTPY
HYSAYETDPAAQSEVVAQSDKPKVLILGSGPNRIGQGIEFDYSCVHAAIALREAGFEAVM
VNCNPETVSTDYDTSDRLYFEPLSFEDVLEVVHAEQQSGTVAGVIVQLGGQTPLGLAKRL
ADAGVPVVGTPPEAINLAEDRGAFGEVLGDAGLPAPKYGTATSFEGAKRIADEIGYPVLV
RPSYVLGGRGMEIVYDEETLAGYIRRATEVTPEHPVLVDRFLDDAIEIDVDALFDGEDLY
LGGVMEHIEEAGIHSGDSSCALPPITLGATDLEEVRRSTEAIARGVGVRGLLNVQYALKD
DVLYVLEANPRASRTVPFVSKATAVPLAKAAALIMTGSTIKDLRGSGVLPAEGDGGRMPA
DSPVAVKEAVLPFHRFRTPEGHGVDSLLGPEMKSTGEVMGVDVSFGKAFAKSQSGAYGSL
PTAGRVFVSVANRDKRSMVFPVKRLADLGFEILATSGTAEVLRRNGVDCTVVRKHYEGST
EAEPNIVDVILAGGVEMVINTPYGNSGPRIDGYEIRTAAVSRDIPCITTVQGAAAAVHGI
EALIRGDIGVRSLQSLQAALKATK
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaggactgacatccagcacgtgctggtgatcggctccgggccgatcgtgatc
gggcaggccgccgagttcgactactcgggcacgcaggcctgccgggtgctgcgggccgag
ggcctgcgcgtgagcctggtgaactcgaaccccgccacgatcatgaccgaccccgagttc
gccgacgcgacctacatcgagccggtcacgccggacttcgtggagaaggtgatcgcgcag
gagcggcccgacgccatcctcgcgaccctgggcgggcagacggcgctcaactgcgcggtc
gcgctgcacgagcgcggggtgctcgaaaagtacggggtggagctgatcggcgccgacatc
gacgcgatccagcgcggtgaggaccggcagaagttcaaggacatcgtgcgcacgatcggc
gccgaggtcccgcgcagccgcgtgtgcaacaccatggaggacgtgcgcgccactgtcgcc
gagctcggcctgccggtggtgatccggccgtcgttcaccatgggcggtctcgggtccggt
ctggcgtacacgcccgaagagctggagcgcctggcgtccaccggcctgagcgaatcgccg
gtcaccgaggtgctcatcgaggagagcgtgctcggctggaaggagtacgagctcgagctg
atgcgcgaccggcacgacaacgtggtggtcgtctgctcgatcgagaacgtcgacgcgatg
ggcgtgcacaccggcgactcggtcaccgtcgcgcccacgatgacgctcacggaccgcgag
taccaggtgatgcgcgacgtcggcatcgccgtgctgcgcgaggtcggcgtggacaccggc
ggctgcaacatccagttcgcgatcaacccggaagacgggcgcatggtcgtgatcgagatg
aatccgcgcgtgtcgcggtcctcggcgctcgcgtcgaaggccaccgggttcccgatcgcc
aagatcgccgcgaagctcgccatcggctacacgctcgacgagatccagaacgacatcacc
ggcgagaccccggcggccttcgagccgacgctggactacgtcgtggtgaagatcccgcgc
ttcgcgttcgaaaagttccccggcgcggaccccaccctcaccaccacgatgaagagcgtc
ggcgaggcgatgtccttcggccgcagcttccccgaggcgctcggcaaggccatgcgctcg
atcgagaccaaggccaccggcttctggaccctgcccgaccccgagggcgtcacgatggag
tccactttggactcgctgcgcgtgccgcacgagggccggctctacgaggtggagcgcgcg
ctgcggctgggcgccaccgtggcgcaggtgcacgacgccagcggcatcgacccgtggttc
atcgaccagatcgcgctgatcggcgaggtcggcgccgaggtgcgtgacgcgccggtgctc
gacggcgagctgctgcgccgtgccaagcgcacgggcctgtccgaccgccagatcgccgcg
ctgcgcccggaactggcgggcgaggacggcgtgcgctcgctgcgccaccgcctcggcgtg
cggccggtgttcaagaccgtggacacgtgcgcggccgagttcaaggcggacacgccgtac
cactactcggcctacgagaccgaccccgcggcgcagtcggaggtcgtggcgcagagcgac
aagccgaaggtcctcatcctcggctccgggccgaaccgcatcgggcagggcatcgagttc
gactactcgtgcgtgcacgccgcgatcgccttgcgcgaagccggtttcgaggccgtgatg
gtcaactgcaaccccgaaaccgtgtccaccgactacgacacgtccgaccggctgtacttc
gagccgctgtccttcgaggacgtgctggaggtcgtgcacgcggagcagcagtcgggcacc
gtggccggcgtgatcgtgcagctcggcggccagaccccgctggggctggccaagcggctc
gccgacgcgggcgtgcccgtggtcggcacgccgccggaggccatcaacctggccgaggac
cgcggcgcgttcggcgaggtgctcggcgacgccgggctgccggcgccgaagtacggcacg
gcgacgtcgttcgagggcgcgaagcggatcgccgacgagatcggctacccggtgctcgtg
cgcccgtcctacgtgctcggcgggcgcggcatggagatcgtgtacgacgaggagaccctc
gccggctacatccgccgcgccaccgaggtcacgcccgagcacccggtgctcgtcgaccgc
ttcctcgacgacgccatcgagatcgacgtcgacgcgctgttcgacggcgaggacctctac
ctcggcggcgtgatggagcacatcgaggaggccggcatccactccggcgactcctcgtgc
gcgctgccgccgatcacgctcggcgccaccgacctcgaagaggtgcgccgctccaccgag
gcgatcgcgcgcggcgtcggcgtgcgcgggctgctgaacgtgcagtacgcgctcaaggac
gacgtgctctacgtcctggaggccaacccgcgtgcttcgcgcacggtgccgttcgtgtcg
aaggccaccgcggtgccgctcgcgaaggcggccgcgctgatcatgaccggctcgacgatc
aaggacctgcgcgggtcgggcgtgctgcccgccgaaggcgacggcggccggatgccggcc
gattcgccggtggcggtgaaggaagccgtgctgcccttccaccgcttccgcacgcccgag
ggccacggcgtggattccttgctgggcccggaaatgaagtccacgggcgaggtgatgggc
gtggacgtgtccttcgggaaggcgttcgcgaagtcgcagagcggcgcgtacggctcgctg
ccgacggccgggcgggtgttcgtgtcggtggccaaccgggacaagcgctcgatggtcttc
ccggtgaagcgcctggcggacttgggattcgagatcctcgcgacgtccggtaccgcggaa
gtgttgcggcgtaacggagtcgactgcacggtcgtgcgcaagcactacgagggttcgacc
gaggccgaacccaacatcgtggacgtgatcctcgccggcggggtcgagatggtcatcaac
acgccctacggcaacagcggcccgcgcatcgacggctacgagatccgcaccgcggcggtg
tcgcgggacatcccctgcatcaccaccgtgcagggcgcggcggcggccgtgcacggcatc
gaagcgctcatccggggtgacatcggggtgcgcagcctccagagcctccaggcggcgctg
aaggccacgaaatga
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