KEGG   Amycolatopsis rhabdoformis: VSH64_03115
Entry
VSH64_03115       CDS       T09694                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
arhd  Amycolatopsis rhabdoformis
Pathway
arhd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:arhd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    VSH64_03115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:arhd03400]
    VSH64_03115
Enzymes [BR:arhd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     VSH64_03115
DNA repair and recombination proteins [BR:arhd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     VSH64_03115
SSDB
Motif
Pfam: PriA_3primeBD
Other DBs
NCBI-ProteinID: WSE31112
UniProt: A0ABZ1IB07
LinkDB
Position
662442..664586
AA seq 714 aa
MSSSEPAPLWDLPEPSRSASEPKASSPRAGKPAAAKTSAGRAKAAAKKAPSRKGQQQPAP
ELPVAKVVVDIPLAHLDRPFDYQVPDKLHEAAVPGCRVRVRFAGQLVDGYLVERTDTTEY
ERKLAYLERVTSSEPVLPASLHAVCRSVADRYGGTLSDVLRLALPPRHAKAEGEPAGEPA
PEPDVPDVSAWTRYQRGPAFLDAVADGKPANAVWQALPGEDWPRRLAEAAAVAASCGRGA
VLVVPDHRDLTRVHEACAAMVGEDAVVALIAGLGPAERYRRWLAVLRGTVRVVVGTRAAM
FAPVADPGLFVVWDDGDDLHLDPHAPYPHVRDVLMDRAHATKSSLLVGGFARTAEAQLLV
ESGWAQAVVADRTELRTAAPRVTPVGEDFDVARDEAARVARLPAVAFEAARQAFAAGLPA
LVQVPRRGYVPGLACGNCRTPAHCRRCAGPLALPGGSVDGAPKPPACRWCGVPETAFRCQ
ACGSVRLRAVIVGAKRTAEELGRAFPGVPVRTSGAAEVLATVPGRPALVVCTPGAEPVAE
GGYGAALLLDGWALLGRQDLRAAEETLRRWMAAGALVRPASSGGRIIVGAEAGLSVVQAL
VRWDPAWHAGLELGQRRELGFPPAMRMASVEGTPDAVASVLDDLPLPDTGEILGPVPLGD
FDDAGNASRERALVRVARPEGKTLAALLHDAAARRDARKAAEPVRIQLDPLELI
NT seq 2145 nt   +upstreamnt  +downstreamnt
gtgagcagctccgaacccgccccgctgtgggaccttccggagccttcgcgctccgcctcg
gagccgaaggcttcctccccgcgtgccggaaagccggccgcggccaagacatcggccggc
cgggccaaggcggccgcgaagaaggccccttcgcgcaaggggcagcagcagccggcgccc
gagctgcccgtggccaaggtcgtggtggacatcccgctggcgcacctggaccgcccgttc
gactaccaggtgcccgacaagctgcacgaggccgcggtgcccgggtgccgggtgcgggtg
cggttcgcgggccagctcgtggacggctacctcgtcgagcgcaccgacaccacggagtac
gagcgcaagctggcctacctcgaacgcgtcacgtcgagcgagccggtgctgccggcgtcg
ctgcacgccgtgtgccgctcggtggccgatcgctacggcggcacgctgtccgacgtgctg
cggctggccctgccgccgcgccacgccaaggcggagggcgagccggcgggggagccggcg
cccgagcccgacgtgccggacgtgtcggcgtggacgcgctaccagcgtggtccggcgttc
ctcgacgccgtggccgacgggaagccggccaacgccgtgtggcaggccctgccgggcgag
gactggccgcggcggctcgcggaggccgcggcggtggcggcctcctgcggccggggcgcc
gtcctcgtggtgccggaccaccgggacctcacgcgggtgcacgaggcgtgtgccgcgatg
gtgggcgaagacgcggtggtggcgttgatcgccgggctcgggcccgcggagcggtaccgg
cgctggctggccgtgctgcgcggcaccgtgcgcgtggtggtgggcacgcgcgcggcgatg
ttcgcgcccgtggccgacccgggcctgttcgtggtgtgggacgacggcgacgacctgcac
ctcgacccgcacgcgccctacccgcacgtgcgcgacgtgctcatggaccgcgcgcacgcc
accaagtcgtccctgctcgtcggcggcttcgcgcgcacggcggaggcgcagctgctcgtg
gagtcgggctgggcgcaggccgtggtggccgaccgcaccgagctgcgcacggcggccccg
cgcgtcacgccggtgggcgaggacttcgacgtggcgcgcgacgaggccgcgcgcgtcgcc
cggctgccggcggtggcgttcgaggcggcgcgccaggcgttcgcggcgggcctgccggcc
ctggtccaggtaccccggcgcggctacgtgcccgggctggcctgcggcaactgccgtacg
cctgcgcactgccgccgctgcgccggcccgctcgctctgccgggcggctccgtcgacggc
gcgcccaagccgcccgcgtgccgctggtgcggcgtgccggagaccgcgttccgctgccag
gcctgcggctcggtgcggctgcgcgcggtgatcgtcggcgcgaagcgtacggcggaagag
ctgggccgcgcgttcccgggcgtgccggtgcgcacgtcgggcgccgcggaggtgctggcc
acggtgccgggccgccccgcgctggtggtctgcacccccggcgccgaacccgtggccgaa
ggcggctacggcgccgccctgctgctcgacggctgggccctgctcggccgccaggacctg
cgcgccgccgaggaaaccctgcgccgctggatggccgccggcgccctggtgcgccccgcc
tcctcgggcggccgcatcatcgtgggcgccgaggcgggcctgtccgtggtccaggccctc
gtgcgctgggaccccgcctggcacgccggcctggaactcggccagcgccgcgagctgggc
ttcccgcccgccatgcgcatggccagcgtcgaaggcacccccgacgccgtcgcctccgtc
ctcgacgacctccccctgcccgacaccggcgaaatcctgggccccgtccccctcggcgac
ttcgacgacgcgggcaacgcctcccgcgaacgcgcgctggtccgcgtggcccgcccggag
ggcaagacgctcgccgccctcctccacgacgcggcggcccgccgggacgcccggaaggcg
gcggaaccggtgcggattcagctggatccgttggaactgatctag

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