Amycolatopsis rhabdoformis: VSH64_03220
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Entry
VSH64_03220 CDS
T09694
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arhd03019
]
VSH64_03220 (rapZ)
Messenger RNA biogenesis [BR:
arhd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VSH64_03220 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
Motif
Other DBs
NCBI-ProteinID:
WSE35088
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All DBs
Position
682905..683762
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AA seq
285 aa
AA seq
DB search
MEVAVVSGLSGAGRSTAAKCLEDLGWFVVDNLPPELIATMVELGAQARGAITKVAVVMDV
RSRAFTDDLASVIKDLDARGYKPRVLFLEATDAVLVRRFEAVRRGHPMQGDGRLADGITA
ERRLLAPLREEADLVLDTSALSVHDLRAKIEDAFGSEASTQTRVTVLSFGYKYGLPMDSD
LVMDVRFLPNPFWIPELREHTGLDGEVRNYVLSQEGAEEFLDRYHQLLRLIGAGYKREGK
RYLTLAVGCTGGKHRSVAISEELAHRLSKEDGMAVKVVHRDLGRE
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgccgtcgtcagcggcctgtcgggagcgggacggtcgaccgcggcgaagtgc
ctggaggacctgggctggttcgtcgtggacaacctgccgccggagctcatcgccaccatg
gtcgagctgggtgcgcaggcgcgcggcgcgatcaccaaggtggccgtggtgatggacgtg
cgctcgcgcgcgttcaccgacgacctggcctcggtgatcaaggacctcgacgcacgcggg
tacaagccgcgcgtgctgttcctggaggccaccgacgcggtgctggtgcgccgcttcgag
gcggtgcgccgcgggcacccgatgcagggtgacggccgcctcgccgacggcatcaccgcc
gagcgccggctgctggcgccgctgcgcgaggaagccgacctggtgctcgacacgtccgcc
ctgtcggtgcacgacctgcgggcgaaaatagaggatgccttcggctccgaagcgagcacg
cagacgcgcgtgaccgtgctgtcgttcggctacaagtacggcctgccgatggactccgac
ctggtgatggacgtgcggttcctgccgaacccgttctggatccccgagctgcgcgagcac
acggggctcgacggcgaggtgcgcaactacgtgctctctcaggagggcgcggaagagttc
ctcgaccgctaccaccagctgctgcgcctcatcggcgccgggtacaagcgcgagggcaag
cggtacctcacgctcgccgtcggctgcacgggcgggaagcaccgcagcgtcgcgatctcg
gaggagctcgcgcaccgactgtccaaggaggacggaatggccgtgaaggtggtgcaccgc
gaccttggccgtgagtga
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