Amycolatopsis rhabdoformis: VSH64_04345
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Entry
VSH64_04345 CDS
T09694
Symbol
ligD
Name
(GenBank) non-homologous end-joining DNA ligase
Organism
arhd
Amycolatopsis rhabdoformis
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Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
WSE31340
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Position
932541..933545
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AA seq
334 aa
AA seq
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MSDGVVLDLDGVELTISSPDKVYFPEHGETKLDLVRYYQAVAGPLLDRLGGRPLLLERYP
DGAGGKSWFQKRVPKSAPEWLTTTVVSTPNGTTSDALVAADLAHVLWAVNQGCLGFHVWP
NRAAALDIADELRIDLDPSPGIGFEQLRAAAGLVREFLTELGIEVHVKTSGSRGLHLYAI
LEPRWDGYQVRAAAVALARALERRHPDLITAQWWKEERGARVFVDFNQNAPHKTVFGAWC
VRPRVGGQVSTPISWADLATVTPDTLTLSTVPALVAEHGDPWAGANERAQSIEPLLELSR
KDLASGLMDAPWPPVYPKMPGEPPRVAPSRAKKA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacggcgtggtgctggatctcgacggggtcgagctcacgatctccagccccgac
aaggtctatttccccgagcacggcgagacgaagctcgacctcgtgcgctactaccaggcc
gtggccggcccgctgctcgaccggctcggcggccggccgctgctgctcgaacgctatccg
gacggcgccggcggcaagagctggttccagaaacgcgtgccgaagtcggccccggagtgg
ctcaccaccacggtggtctccacgcccaacggcacgaccagcgacgcactcgtggccgcc
gacctcgcccacgtgctgtgggccgtgaaccagggctgcctcggcttccacgtgtggccc
aaccgggccgcggccctcgacatcgccgacgagctgcgcatcgacctcgacccgtcaccc
ggcatcggcttcgagcagctgcgcgctgcggccgggctcgtccgcgagttcctcaccgag
ctcggcatcgaggtccacgtgaaaacgtccggctcacgcggcctgcacctctacgccatc
ctcgaaccgcgctgggacggctaccaggtccgcgccgccgccgtcgccctcgcgcgcgcc
ctcgaacgccgccacccggacctcatcacggcccagtggtggaaggaggagcgcggcgcc
cgcgtgttcgtggacttcaaccagaacgcgccccacaaaacggttttcggcgcgtggtgc
gtgcgcccgcgcgtgggcggccaggtctccacgccgatctcgtgggccgatctcgccacc
gtcaccccggacacgctcacgctctcgaccgtgccggccctggtcgccgagcacggtgac
ccgtgggcgggcgcgaacgagcgggcgcagtcgatcgagccgctgctggagctgtcccga
aaggacctcgcgtcggggctgatggacgcgccgtggccgccggtgtacccgaagatgccg
ggggagccgccgcgcgtggcgccgagccgcgcgaaaaaggcctga
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