Amycolatopsis rhabdoformis: VSH64_04420
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Entry
VSH64_04420 CDS
T09694
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VSH64_04420
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
VSH64_04420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arhd02000
]
VSH64_04420
Transporters [BR:
arhd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
VSH64_04420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
WSE31354
LinkDB
All DBs
Position
953075..954088
Genome browser
AA seq
337 aa
AA seq
DB search
MSTTTRRGLVLAVAGVALAATACGTTHDNAPGASSGAGPAAQACKGPGGKFTIGMSQANL
AEPYRVRMDDDIRTAAASIPQFTVNFADAAQDNAKQVEQVSTFLTQKIDLLIISPNEATP
LTGVVKKAYDQGIPVLVLDRKVDGDAYTSFIGADNVDIGRQAGQYFKEHLLPQGGKIVEL
KGLAGSTPAKERADGFAAGIAGSGITIVGTADADWLRDKGQQQADALLKAHPDAQAIFSE
NDPMAEGARLAAQNAGKAALPIVGIDGLPVPEGGIKAVEAGRLSATFIYPTGGAEAVAAA
KKLLIDCGQVAKAQTLPTRQITKDNATQVYAELNQGS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaccactcgccgcgggctggtgctcgcggtcgcgggggtcgcgctcgcggcc
acggcctgcggcaccacgcacgacaacgcacccggggcctcgtcgggcgccgggcccgcc
gcgcaggcgtgcaaggggccgggcgggaagttcaccatcggcatgagccaggcgaacctc
gccgagccctaccgcgtgcggatggacgacgacatccgcacggcggccgcgtcgatcccg
cagttcacggtgaacttcgccgatgccgcgcaggacaacgcgaagcaggtggagcaggtc
agcacgtttctcacgcagaagatcgacctgctgatcatcagccccaacgaggcgacgccg
ctcaccggcgtggtgaagaaggcttatgaccagggcatcccggtgctggtcctcgaccgc
aaggtggacggcgacgcgtacacctcgttcatcggcgcggacaacgtggacatcgggcgc
caggccggccagtacttcaaggagcacctgctgccccagggcgggaagatcgtggagctg
aagggcctcgcgggctcgacgccggcgaaggagcgcgccgacggtttcgccgcgggcatc
gcgggctcgggcatcacgatcgtcggcaccgccgacgccgactggctgcgggacaagggc
cagcagcaggccgacgcgctgctcaaggcccaccccgacgcgcaggccatcttctcggag
aacgacccgatggccgaaggcgcgcggctcgcggcgcagaacgcgggcaaggcggcgctg
ccgatcgtcggcatcgacggcctgcccgtgcccgagggcggcatcaaggcggtggaggcc
gggcggctgtcggccacgttcatctaccccacgggcggggcggaagcggtcgccgcggcg
aagaagctgctgatcgactgcggtcaggtcgcgaaggcgcagacgttgccgacccgacag
atcacgaaggacaacgcgacgcaggtctacgccgaactcaaccagggctcatga
DBGET
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