Amycolatopsis rhabdoformis: VSH64_05405
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Entry
VSH64_05405 CDS
T09694
Name
(GenBank) citrate/2-methylcitrate synthase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00020
Citrate cycle (TCA cycle)
arhd00630
Glyoxylate and dicarboxylate metabolism
arhd01100
Metabolic pathways
arhd01110
Biosynthesis of secondary metabolites
arhd01120
Microbial metabolism in diverse environments
arhd01200
Carbon metabolism
arhd01210
2-Oxocarboxylic acid metabolism
arhd01230
Biosynthesis of amino acids
Module
arhd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
arhd_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
arhd_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VSH64_05405
00630 Glyoxylate and dicarboxylate metabolism
VSH64_05405
Enzymes [BR:
arhd01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
VSH64_05405
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
HTH_17
MerR
Sigma70_r4_2
HTH_23
MerR_1
HTH_29
HTH_IclR
HTH_28
Rv2175c_wHTH
HTH_3
Motif
Other DBs
NCBI-ProteinID:
WSE31545
LinkDB
All DBs
Position
complement(1168653..1169825)
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AA seq
390 aa
AA seq
DB search
MSTDTEVLSIAEAADLLGVKPSTVYAYISRGLLNRRRLPRDRRSWLSRSEVEGFGQRKGT
RTLLHDDEPGVSSDTSQVARLDGDALLYREHDAVGLARTASYEEVAELLWEQPGVPPARE
LEPDLVAAIHRLQDTMPASSLPLDRLKVTATLLGARDSFRYDLSVPSVLSAARTMAPAFV
ESLPQPGAAGERGRPIAERLWSRLTAEPETPERIAVLSAALVLLADHGLGPSTRAVREAA
AKAADPYSAVLAGMSVASGLLLGGGSSLAVQAWLGDIASPDSVSRVLEQRLLRGDRLSGF
GQPRYRSVDPRASELLRLLADAPADPERLAIVEAAIDLVRRRRGLEPNVEFALGALCFVH
GMAEGAGEAVFVIARTAGWIAHSLETYTVR
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacggacacggaggtgctgtcgatcgccgaggcggccgacctcctcggggtcaag
ccgagcacggtgtacgcctacatcagccgcggcctgctgaaccgccgccggctgccccgc
gaccggcgcagctggctctcgcgcagcgaggtcgaggggttcgggcagcgcaagggcacg
cgcacgctgctgcacgacgacgagcccggcgtgtcctccgacaccagccaggtcgcgcgc
ctcgacggcgacgcgctgctctaccgcgaacacgacgccgtcgggctcgcgcgcacggcg
tcgtacgaagaggtggccgagctgctgtgggagcagcccggcgtgccacccgcgcgggag
ctcgaaccggacctggtcgcggccatccaccggctgcaggacaccatgccggcctcgagc
ctgccgctcgaccggctcaaggtcaccgcgaccctgctcggcgcgcgcgactcgttccgc
tacgacctgtccgtgccctcggtgctctcggccgcgcgcacgatggcgccggcgttcgtg
gagtcgctgccgcagccgggcgccgccggcgaacgcggccggcccatcgccgagcggctg
tggagccggctcaccgcggaacccgagacaccggaacggatcgcggtgctctcggccgcg
ctggtgctgctcgccgaccacggcctcggtccgtcgacgcgcgcggtgcgcgaggccgcg
gccaaggcggcggacccgtactcggccgtgctcgcgggcatgagtgtcgcgagtggactg
ttgctgggcggcggttcgtcgctggcggtgcaggcgtggctgggcgacatcgcctcaccc
gactcggtttcccgcgtgctcgaacagcggctgctgcgcggcgaccggctgtccggcttc
gggcagccgcgctaccgcagcgtcgatccgcgcgcctcggagctgctgcgcctgctcgcc
gacgcgcccgccgaccccgaacggctggccatcgtggaggcggcgatcgacctggtgcgc
cgccggcgcggcctcgagccgaacgtcgagttcgcgctgggcgccttgtgtttcgtccac
ggcatggccgagggcgccggggaggcggtgttcgtgatcgcccgcacggcggggtggatc
gcgcactctctggagacctacaccgtccggtga
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