Amycolatopsis rhabdoformis: VSH64_05980
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Entry
VSH64_05980 CDS
T09694
Name
(GenBank) ABC transporter ATP-binding protein
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arhd02000
]
VSH64_05980
Transporters [BR:
arhd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VSH64_05980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_25
Zeta_toxin
AAA_16
AAA_29
AAA_5
RsgA_GTPase
AAA
DEAD
ABC_membrane_3
AAA_24
NACHT
TsaE
DUF87
APS_kinase
AAA_7
AAA_33
MMR_HSR1
DUF815
Motif
Other DBs
NCBI-ProteinID:
WSE31657
LinkDB
All DBs
Position
complement(1288347..1292168)
Genome browser
AA seq
1273 aa
AA seq
DB search
MSGTQEKSRWLRRLSGYVLRHRRELLIAFGAAVLGSACQTVVPLLERQIVDGVILSRTAS
LWPWLIALLVIAAAAFVFAYQRRYHGGRVALAVQYDLRNDIQAHLQRLDFANLDRMPTGQ
VVSRATSDSALVQGLLSLLPIMSGNILLVLLSLGVMLVLSPLLALVSLIVVPLLLTVSYR
MRRRIFPATWAAQQREGDVVQIVDEDVNGVRVVKAFGQEGRELNRLADTAGDLYGMQLRA
VRLQSRYQPLLQAIPALGQVAILVLGGWLALHHGLSLGTFLAFSTYVGQLMAPARQLAGV
LAISQQARAGVERIFQLIDLEPDIADAPDAVELPTAKGEITFEDVHFGYSPDAPVLRGFD
LRVGAGERVALIGPSGSGKTTATMLVSRFHDPDSGAVLLDGQDLRTVRLQSLRSQVGVVF
EESFLFSDTIRANIAYGRPGATDEEISAAAKVAEADTFIRALPQGYETVVGERGLSLSGG
QRQRVALARAILTDPRVLVLDDATSAVDANTEESINASLRMVLAGRTTLLVAHRRSTLHL
ADRVVVLDHGVVADQGTHEELLDRSALYRTLLTGLEEEAAERVGDRIEALTAAGTTASAW
RGDRTGQPRNGQRLAARPTGAAGIGAGLGGSAGGRSWRAALPPTPQLLASVDRLKPVRDF
AKVDLETEARQQRTFSLRTLLREFRRPLLFGLLLVVIDAVASVVGPVFVKSGIDDGVLQG
SQAVLFGAAGLFLLITLVAFLDEVAQTFVTGRTAQRVMLSLRIRIWAQLQRLSLDYYERE
MAGRIMTRMTTDVDQFESLIQNGLLSALVAFVTFAGVGVTLVVVNPLLGLCTLTVVVPLA
IGTVIFRRRAAKLYDVARERVAIVNADFQESLSGVRESQAFAHEDETIRRFRRLGRDYLD
SRYSAQRLAATYFPFVQFLSAGADAIVLGVGAGMIYSGRLTPGALIAFILYIDLFFSPIQ
QLSQVFDSWLQTRVSVSRISDLMRLETLTPPATSPLDPGRLRGEITFDGVRFAYPSAPGP
VSAERRGPADPRLVAGSSVVLKPPEALREVDLTIAAGETVALVGETGAGKSTLVKLLARF
YDPDTGSVRVDGHDLRSLDLAAYRRALGYVPQEAFLFTGTVRDNIAYGRADATDAEVEAA
ARAVGAHDFVATLPGGYLHEIAERGRSLSAGQRQLLALARAQLVDPAILLLDEATSNLDL
AAEAHVADAMRTLAAGRTTIVIAHRLQTAQSADRIVVLDHGRIAESGAHAELLARGGRYA
GMWEAFELLSGQR
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggcacgcaagagaagtcccgctggctgcgccgcctcagcggctacgtgctgcgc
caccgccgcgagctgctgatcgcgttcggcgccgccgtgctcggcagcgcctgccagacc
gtggtgccgctgctggaacgccagatcgtcgacggcgtgatcctcagccgcacggcctcg
ctctggccgtggctcatcgcgctgctcgtgatcgccgcagcggccttcgtgttcgcctac
cagcggcgctaccacggcggccgcgtcgcgctggccgtgcagtacgacctgcgcaacgac
atccaggcccacctgcagcgcctggacttcgcgaacctcgaccgcatgcccacgggccag
gtcgtgtcgcgcgcgacttcggattccgcgctggtgcaggggctgctcagcctgctgccg
atcatgagcggcaacatcctgctggtcttgctctcgctcggcgtgatgctggtcctctcc
ccgctgctcgcgctcgtgagcctgatcgtcgtgccgctgctgctcaccgtgagctaccgg
atgcggcgccggatcttccccgccacctgggccgcgcagcagcgcgagggcgacgtggtg
cagatcgtggacgaagacgtgaacggcgtgcgcgtggtcaaggcgttcggccaggaaggc
cgcgagctgaaccgcctggccgacaccgcgggcgatctctacggcatgcagctgcgcgcc
gtgcggctgcagtcgcgctaccagccgctgctgcaggcgatccccgcgctcggccaggtc
gcgatcctcgtgctcggcggctggctcgcgctgcaccacgggctgagcctcggcacgttc
ctcgcgttctccacctacgtcggccagctgatggcccccgcgcgccagctcgccggcgtg
ctcgcgatcagccagcaggcccgcgccggcgtggagcggatcttccagctgatcgacctg
gaaccggacatcgccgacgcacccgacgccgtcgagctgccgaccgccaagggcgagatc
acgttcgaggacgtccacttcggctattcccccgacgcgccggtgctgcgcgggttcgac
ctgcgtgtcggcgccggcgagcgcgtggcgctgatcggcccgagcggcagcggcaagacc
acggcgaccatgctcgtctcccgcttccacgacccggactccggcgccgtgctgctcgac
ggccaagacctgcgcaccgtgcggctccagtccctgcgttcgcaggtcggcgtggtgttc
gaggagagtttcctgttctccgacacgatccgcgccaacatcgcctacggccggcccggt
gccaccgacgaggagatctccgcggcggccaaggtcgccgaggccgacaccttcatccgc
gcgctgccgcagggctacgaaaccgtggtcggcgaacgcgggctctcgctttcgggcggg
cagcgccagcgcgtggccctcgcccgcgcgatcctcaccgacccgcgcgtgctcgtgctc
gacgacgccaccagcgccgtcgacgccaacaccgaggaatcgatcaacgcgtcgctgcgc
atggtgctggccgggcgcaccacgctgctcgtcgcgcaccgccgctcgaccctgcacctg
gccgaccgcgtggtggtgctcgaccacggcgtggtcgccgaccagggcacccacgaggag
ctgctcgaccgcagcgcgctgtaccgcacgttgctcacgggcctcgaagaggaagccgcc
gaacgggtcggcgaccggatcgaagcgctcaccgcggccggcaccacggcgtcggcctgg
cgcggtgaccgcaccggacagccgcgcaacggtcagcggctcgccgcccgtcccaccggc
gccgccggcatcggagccggcctcggcggctcggccggcggccggagctggcgcgccgcg
ctgcccccgacccctcagctgctggccagcgtcgaccggctgaaacccgtgcgggacttc
gcgaaggtcgacctcgaaaccgaagcccgccagcagcgcacgttctccctgcgcacgctg
ctgcgcgaattccggcggccactgctgttcgggctgctgctggtggtgatcgacgccgtc
gcgtcggtggtcgggccggtgttcgtgaagagcggcatcgacgatggggtgctgcagggt
tcgcaggccgtgctgttcggcgcggcggggctgttcctgctgatcacgctcgtggcgttc
ctcgacgaggtggcgcagacgttcgtgaccgggcgcaccgcgcagcgcgtgatgctgtcg
ctgcgcatccggatctgggcgcagctgcaacggctttcgctcgactactacgagcgcgag
atggccggccggatcatgacgcggatgaccaccgacgtcgaccagttcgagtcgctcatc
cagaacgggttgctctcggcactggtcgcgttcgtgacgttcgccggtgtcggcgtgacg
ctggtcgtggtcaacccgctgctgggcctctgcacgctcacggtggtggtgccgctggcc
atcggcacggtgatcttccgccggcgcgcggcgaagctctacgacgtggcgcgcgaacgc
gtggcgatcgtgaacgccgatttccaggaaagcctttcgggcgtgcgggaatcgcaggcg
ttcgcgcacgaggacgagacgatccgccgcttccgccgcctcggccgcgactacctcgac
tcgcggtactcggcgcagcgcctggccgcgacctacttcccgttcgtgcagttcctctcg
gcgggcgccgacgcgatcgtgctcggcgtcggcgccgggatgatctactcgggccggctc
acgccgggtgcgctgatcgcgttcatcctctacatcgacctcttcttctcccccatccag
cagctttcgcaggtgttcgactcgtggctgcagacgcgcgtgtcggtgagccgcatctcc
gacctcatgcgcctggagacgctcaccccgcccgccacctcgccgctggacccgggccgg
cttcgcggcgagatcaccttcgacggcgtgcggttcgcctacccgtcggcaccgggtccg
gtgtctgccgaacgccggggccccgccgatccgcggctggtcgcgggctcgtccgtggtg
ctgaaaccgccggaggccttgcgtgaggtcgacctcacgatcgcggccggcgagaccgtg
gccctggtcggcgagacgggcgcgggcaagtcgacgctggtcaaactcctcgcgcgcttc
tacgaccccgacaccggcagcgtccgcgtcgacggccacgacctgcgctccctcgacctc
gccgcctaccgccgcgcgctcggctacgtgccccaagaggcgttcctcttcaccggcacc
gtgcgcgacaacatcgcctacggccgcgccgacgccaccgacgccgaagtggaagccgcc
gcccgcgcggtcggcgcccacgacttcgtggccaccctcccgggcggctacctccacgaa
atcgccgaacgcggccgctccctgtcggcgggccaacgccaactcctcgcgctggcccgc
gcccaactcgtggacccggccatcctcctgctcgacgaggccacgtccaacctcgacctc
gccgccgaagcccacgtcgccgacgccatgcgcaccctggccgccggccgcaccaccatc
gtcatcgcccaccgcctgcagaccgcccagtccgccgaccgcatcgtcgtcctcgaccac
ggccgcatcgcggagtccggcgcgcacgccgagctcctggcgcgcggggggcggtatgcc
gggatgtgggaggcgttcgagctgctgtcggggcaacggtga
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