Amycolatopsis rhabdoformis: VSH64_05990
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Entry
VSH64_05990 CDS
T09694
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00061
Fatty acid biosynthesis
arhd00071
Fatty acid degradation
arhd01100
Metabolic pathways
arhd01212
Fatty acid metabolism
arhd02024
Quorum sensing
arhd04146
Peroxisome
Module
arhd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VSH64_05990
00071 Fatty acid degradation
VSH64_05990
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VSH64_05990
09145 Cellular community - prokaryotes
02024 Quorum sensing
VSH64_05990
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
arhd01004
]
VSH64_05990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arhd04147
]
VSH64_05990
Enzymes [BR:
arhd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VSH64_05990
Lipid biosynthesis proteins [BR:
arhd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VSH64_05990
Exosome [BR:
arhd04147
]
Exosomal proteins
Exosomal proteins of breast milk
VSH64_05990
Exosomal proteins of breast cancer cells
VSH64_05990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WSE31659
UniProt:
A0ABZ1IC97
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All DBs
Position
1292767..1294281
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AA seq
504 aa
AA seq
DB search
MSFNLATILRESALAQPEKDFLRFPGGIHSYAEVDAASGRVATALRQRGFAPGDKIAVQL
ANVPEFVFAYFGILKAGLTMVPLNPLLKADEIAYHLADSDSRLLIADTALVGEVTKALAS
VPEVAAVVVGDLSGWPAEAVEFSELLAAADDGDLHPGAADDTAVLLYTSGTTGRPKGAEL
SHFSLYMTCTIGGQTFGAEPDDVVLAVLPFFHVYGLSSILNSAARHGRTVSVVRRFEPDA
VLAAIERDRVTIMAGVPTMYHALAVADSSAYDTSSLRIGSSGGAAIPEQVLLAFEEKYGI
PVLEGYGLSESASTTTVNPGAANRKVLSIGKPIWGVQLRIVDGADHPLPPGPDHVGEIVL
RGHNITKGYYKRPAETAEAFRGGWFHTGDLGYVDEDGFVFVVDRKKDLVIRGGYNVYPRE
VEELLYRHPAVAEAAVIGEPDERLGEEIVAVVSLKPGASASPSEIVAWTKERIAAYKYPR
RVRIVDELPKGPTGKITKLPLRGL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttcaacctggccacgatcctgcgggagtccgctctcgcccagccggaaaaggac
tttctgcgttttccgggtggaatccactcctacgccgaggtggacgcggcgtccggccgg
gtcgccacggcgttgcggcagcggggtttcgcgcccggcgacaagatcgcggtgcagctg
gccaacgtgcccgagttcgtgttcgcgtacttcgggatcctcaaggccgggctcacgatg
gtgccgctgaacccgctgctcaaggccgacgagatcgcctaccacctggccgactccgac
tcacggctgctcatcgccgacacggcactcgtgggcgaggtgaccaaggcgctcgcctcg
gtgcccgaggtcgccgcggtcgtcgtgggtgatctttccggctggccggccgaggcggtc
gagttctccgagctgctcgccgcggcggacgacggcgacctgcacccgggcgcggccgac
gacaccgccgtgctgctctacaccagcggcaccaccggccgcccgaaaggcgccgagctg
tcgcatttctcgctgtacatgacgtgcacgatcggcggccagaccttcggcgcggaaccc
gacgacgtggtgctcgccgtgctgccgttcttccacgtctacggcctctccagcatcctc
aactccgcggcccgccacgggcgcacggtgtcggtggtgcgccgcttcgagccggacgcc
gtgctggccgccatcgagcgcgaccgtgtgacgatcatggccggcgtgcccacgatgtac
cacgcgctggccgtcgccgacagctcggcgtacgacacgagcagcctgcgcatcggcagc
tccggcggcgccgcgatcccggaacaggtgctgctcgcgttcgaggagaagtacggcatc
ccggtcctggagggctacggcctgtccgaatccgcgtcgacgaccaccgtgaacccgggc
gccgcgaaccggaaggtgctctccatcggcaagccgatctggggcgtgcagctgcgcatc
gtcgacggcgccgaccacccgctgccgcccgggcccgaccacgtcggcgagatcgtgctg
cgcgggcacaacatcaccaagggctactacaaacgccccgccgaaaccgccgaagccttc
cgcggcggctggttccacaccggcgacctcggctacgtcgacgaggacggcttcgtgttc
gtggtggaccgcaagaaggacctcgtgatccgcggtgggtacaacgtgtacccgcgcgag
gtggaggagctgctctaccgccacccggccgtggccgaggccgccgtgatcggggagccg
gacgagcggctgggagaggagatcgtggcggtggtttcgctgaagccgggcgcgtcggct
tcgccatcggagattgtggcctggacgaaggagcggatcgcggcgtacaagtacccgcgt
cgcgtgcggatcgtcgacgaactgccgaaggggccgacggggaagatcacgaagctgccg
ttgcgggggttgtga
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