Amycolatopsis rhabdoformis: VSH64_07605
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Entry
VSH64_07605 CDS
T09694
Name
(GenBank) IclR family transcriptional regulator
KO
K20539
IclR family transcriptional regulator, blcABC operon repressor
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VSH64_07605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arhd03000
]
VSH64_07605
Transcription factors [BR:
arhd03000
]
Prokaryotic type
Helix-turn-helix
IclR family
VSH64_07605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
Dimerisation
HTH_20
Motif
Other DBs
NCBI-ProteinID:
WSE31972
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All DBs
Position
1633411..1634187
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AA seq
258 aa
AA seq
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MTSSPSSAGLPVPSVARAAYILDALAAAPDGLPLSELARTVGAPKSSCLAVCTTLVTTGL
LTRTPAGHYRLGWKVVPLGRAYLAKSGFVLEFRRVDAELGLLAEDTIVLSLLDGRNVVYV
ETRPGLRTLAMSYEIGLRLPAHCTASGKALLASLSDDEIAGRYADGRFETLTPHSISRRP
QLEAEITRTRERGYAVDDEETAPGMMCVGAAVAGRGGQPVGALSVSLVKSTVDNQRLERS
TSAILRLASAITERLGGL
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaccagttcgccttcttcggccggcctgccggtgccctcggtcgcccgcgccgcctac
atcctcgacgcgctcgccgccgcccccgacggactgccgctcagcgagctcgcgcgcacc
gtcggcgcgcccaagagcagctgcctcgccgtgtgcaccacactcgtgaccaccggcctg
ctcacgcgcaccccggccgggcactaccggctgggctggaaggtggtaccgctcgggcgc
gcctacctcgcgaaatcggggttcgtgctggagttccggcgggtcgacgccgagctcggc
ctgctggccgaggacacgatcgtgctgtccctgttggacggtcgcaacgtggtctacgtc
gagacccgaccgggcctgcgcacgctcgcgatgtcgtacgagatcggcctgcgcctgccg
gcccactgcacggccagcggcaaggccctgctcgcctccctgagcgacgacgagatcgcc
ggccgctacgccgacggccgcttcgaaaccctgaccccgcacagcatttcgcgccggccc
cagctcgaagccgagatcacccgcacccgcgagcgcggctacgccgtggacgacgaggag
accgccccgggcatgatgtgcgtcggcgccgccgtcgcgggccgcggcggccaacccgtg
ggcgcgctctcggtgagcctggtcaagtccactgtggacaaccaacggctcgaacgctcg
acgtccgcgatcctccgcctggcctccgcgatcaccgaacgcctcggcggcttgtag
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