Amycolatopsis rhabdoformis: VSH64_07615
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Entry
VSH64_07615 CDS
T09694
Name
(GenBank) UbiD family decarboxylase
KO
K16874
2,5-furandicarboxylate decarboxylase 1
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00365
Furfural degradation
arhd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00365 Furfural degradation
VSH64_07615
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
WSE31974
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Position
complement(1635558..1636976)
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AA seq
472 aa
AA seq
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MKDLRSFLAEVVSTGAGEVKHVSKQVDPRFGVTAYGAWYDKRGDYPALLFTDVAGSELPC
LTNLVATHERMALALGVDTETLTRSSVAGQGRAPHPPVPFEGAAPVQEVVWRGDDADLTR
LPIPTHNELDGGPFLTAAVGVTRDPDTGAVNAGIYRHHVYGPKRLGVWFFGSHDGGTIHR
KYAERGEPTPIALVIGHHPAFLMGAVSRVPGIGGEYDAAGAYLGESVQTVPAVTSGIPVP
AHAEIVIEGHILPDELEEEGPFAEWPGHYVGGGRKPVIEVDAITMRRDAIFQDIQASGRE
HRLMGALPRIASIHETVQQKVPGLRAVNIPLHARMHCYLSIRKTSDTDPTRAAFAALNTE
PENLRAIVIVDDDIDVYDEREVAWAIGTRFDATNDLQIIPRWNGPGGLLPTNWAYDEAGG
RTPQRSSAVIVDATKPAPPVVFPARARVPEDALAAVDVEAIQTITDVSQVLG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggatctgcggtcgtttctcgcggaggtggtctcgaccggcgcgggcgaggtcaag
cacgtgtcgaagcaggtggacccgcgcttcggcgtcaccgcctacggagcgtggtacgac
aagcgcggcgactacccggcgttgctgttcaccgacgtcgcgggcagcgagctgccctgc
ctgacgaacctcgtcgcgacccacgagcgcatggcgctggcgctgggcgtcgacacggag
acgctcacgcggtcttcggtcgcaggtcaggggcgtgcaccgcacccgccggtgccgttc
gagggcgccgcaccggtgcaggaggtggtgtggcgcggcgacgacgccgacctcacccgc
ctgccgatcccgacccacaacgaactcgacggcggcccgttcctcaccgccgccgtcggc
gtgacccgcgaccccgacaccggtgccgtgaacgccggcatctaccgccaccacgtgtac
ggcccgaagcggctcggcgtgtggttcttcggttcccacgacggcggcacgatccaccgg
aagtacgccgagcgcggtgagcccacgccgatcgcgctcgtgatcgggcaccaccccgcg
ttcctcatgggcgccgtgtcgcgcgtgcccggcatcggcggcgagtacgacgccgccggc
gcctacctcggcgagtccgtgcagaccgtgcccgcggtgacatcgggtattcccgtgccg
gcgcacgccgagatcgtgatcgagggccacatcctgcccgacgagctcgaagaggaaggc
ccgttcgccgagtggcccggccactacgtcggcggcggccgcaagcccgtgatcgaggtc
gacgccatcacgatgcgccgcgacgcgatcttccaggacatccaggcctccggccgcgaa
caccggctgatgggcgcgctcccccgcatcgcgagcatccacgaaacggtgcagcagaag
gtgccgggcctgcgcgcggtcaacatcccgttgcacgcccgcatgcactgctacctctcc
attcgcaagacctcggacaccgaccccacgcgcgccgccttcgccgcgctcaacaccgaa
cccgagaacctgcgcgccatcgtgatcgtcgacgacgacatcgacgtctacgacgaacgc
gaagtcgcgtgggccatcggcacccgcttcgacgccacgaacgacctgcagatcatcccg
cgctggaacggccccggcggcctgctgcccactaactgggcctacgacgaagccggcggc
cgcaccccgcaacgctcctcggccgtgatcgtcgacgcgacgaaacccgcgccgcccgtg
gtgttcccggcccgcgctcgggtaccggaggacgcgttggcggccgtggacgtggaggcc
atccagacgatcacggacgtctcccaagttctcggatag
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