Amycolatopsis rhabdoformis: VSH64_08365
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Entry
VSH64_08365 CDS
T09694
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arhd03000
]
VSH64_08365
Transcription factors [BR:
arhd03000
]
Prokaryotic type
Helix-turn-helix
Other families
VSH64_08365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
AAA_lid_14
HTH_50
HTH_30
Sigma54_activ_2
HTH_28
HTH_17
HTH_7
SET7_N
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WSE32120
UniProt:
A0ABZ1ICG2
LinkDB
All DBs
Position
1784846..1786537
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AA seq
563 aa
AA seq
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MGYEIDTRDGVARLRHARELFLTERRLPDDLPPWLSAAWRRSRFAGLDVTRDHVPAVPVP
LETPLVRAATPVLAKLAGDLVGLGAAVVLSDGHARVVGCWADEEAVGAHLARIDTRLGAD
LSEPSTGTNGISHVLDTGGPFVLGGPEHLFELYQNTVCAGAPVTDPVTRKILGAVAVVCE
LDAPLRVLHAITTTATGAIERELVHATSAHEHRLLQAYLRAGPARNPIAVLDGRTRLVSA
AAAGLLRPQDIDTLESYAIEAAREGALPTTELVFDDGVKVHLHPAVPGDSAGVLIVVDPP
PPSAERRRARLSLFADAALSGSSPAWRSLERSVARVRTRPMLLLGEPGVGKADVARAVLG
DPLVLDAADDDTWLAEVQEALAQPAVLLRHVERLHRSRAARLATLLAGEHPARVIATFTT
GTGSVCADVLRTGWSPVEILVPGLRERTADIPELARRFGGVHLTQDAQTTLQRHDWPGNL
AELKAVMASAAAEAAGPTVSARHLPGRLRSSAAHPRLTELEKAERQAISDALLTANGNRV
QAATLLGIGRATLYRKMRRYGLD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgggctacgagatcgacacgcgagacggggtcgcccgcctgcggcacgccagggaactc
ttcctgaccgagcggcggctgccggacgatctgccgccgtggttgtccgcggcgtggcga
cggtcccgctttgccgggctggacgtcacccgtgaccacgtgccggccgttcccgttccg
ttggagacgccgctggtccgcgcggcgacgccggtgctggccaagctcgccggcgatctc
gtcgggctcggcgccgcggtggtgctcagcgacggccacgcgcgggtcgtcggctgctgg
gccgacgaggaggcggtgggcgcccacctggcccggatcgacacccggctgggtgcggac
ctttcggagccctccaccgggaccaacgggatcagccatgtcctggacacgggcggccct
ttcgtgctgggcgggcccgagcacctcttcgagctgtaccagaacaccgtgtgcgcgggc
gcccccgtcaccgacccggtcacccggaagatcttgggcgcggtcgcggtggtgtgcgag
ctcgatgcgccgctgcgggtgctgcacgccatcacgaccacggcgaccggcgcgatcgag
cgcgagctggtgcacgccacctcggcgcacgagcaccgcctgctccaggcctacctgcga
gccgggcccgctcggaatccgatcgccgtgctggacggccggaccaggctcgtcagcgcc
gccgcggccggcctgttgcggccgcaggacatcgacaccctggagtcctacgcgatcgag
gcggcgagggaaggcgcgctgccgacgaccgagctggtcttcgacgacggggtgaaggtc
cacctccaccccgcggtaccgggagacagcgcgggcgtgctgatcgtcgtcgacccacca
ccgccgagtgcggaacgccgccgcgccaggctttccctcttcgcggacgccgcgttgtcc
ggtagctcgccggcttggcgctcgctcgagcggtccgtggcgcgcgtgcgcacccgcccg
atgctgctgctcggcgaaccgggcgtgggcaaggccgacgtcgcccgagcggtgctcggc
gatccgctcgtcctcgatgcagccgacgacgacacctggctcgcggaggtccaggaggcg
ctcgcacagcccgcggtgctgctccgacacgtcgagcgcctgcaccgaagccgagccgct
cggctcgccacgctgctggccggcgagcatcccgcacgggtgatcgcgacgttcaccacc
ggcaccggttcggtctgcgcggacgtgctgcgcaccggctggtcgccggtcgaaatcctg
gtgcccggcctgcgtgagcgaacggccgacatccccgagctcgcgcggcgcttcggcggc
gtgcacctcacgcaggacgcgcagaccaccctgcagcgacacgactggccgggcaacctc
gccgagctgaaggccgtgatggcctcggccgcggcggaggccgccgggccgaccgtcagc
gcacgccacctgccgggacggctgcgctcatcagccgcacatccgcgtttgacggagttg
gaaaaggctgagcggcaggccatctccgatgcattgctgacggccaacggcaaccgcgtc
caggcggcgacgctgctcggcatcggccgcgcgacgctctaccgcaagatgcggcgttac
gggcttgattga
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