Amycolatopsis rhabdoformis: VSH64_08540
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Entry
VSH64_08540 CDS
T09694
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd02010
ABC transporters
arhd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VSH64_08540
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VSH64_08540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arhd02000
]
VSH64_08540
Transporters [BR:
arhd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VSH64_08540
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
WSE32155
UniProt:
A0ABZ1IFB8
LinkDB
All DBs
Position
complement(1826566..1827726)
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AA seq
386 aa
AA seq
DB search
MIRFRRGRVVASALTVLAVGVGSACSAPGSSPTTDASTTGPIKMAVVNAQSGQLSSLGAW
EYKGAKLAVDQWNAKGGINGRKIQLDVFDDTGDPTTGTNLARKIASEGYVAMIGTAESAV
TVAMAPVLQQAKIPSITSGQSPSITAVKSPFQFLNGPTSTTYDETLAKYLVDQKSLKNIA
FISNNGSYGKGEHDAFGKALADRGIKPVDDQVVTTDQKDFSAALTSIRQKNPQVLFVGTE
EVEAGLIVKQAHELGLNTTVAGAAPMGTTVYLQTAGAANAEGTVVSSPYLSNDTSDASRA
FAQAYKAAYNEDAELHGAKSYDGTNIFLTAMKDSNAATGLQLADKIRATQYPGLLGTFAF
DQSGVGIHATSIGVITGGKLIATPTS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatccgattccgacgcgggcgcgtggtggcgtccgcactcacagtgctggccgtaggc
gtcggcagcgcctgcagcgctcccggcagctcgccgacgaccgacgcttcgacgaccggt
cccatcaaaatggcggtggtcaacgcccagagcggacagctcagttcgctgggagcctgg
gagtacaagggggcgaagctcgccgtcgaccagtggaacgcgaagggcgggatcaacggc
cgcaagatccagctcgacgtgttcgacgacaccggtgaccccaccaccggcaccaacctc
gcccgcaaaatcgccagcgaaggctacgtcgcgatgatcggcactgccgagagcgccgtc
accgtcgccatggcgcccgtgctgcaacaggccaagatcccgagcatcacctccgggcag
tcgccctcgatcaccgcggtgaagagcccgttccagttcctcaacggcccgaccagcacc
acgtacgacgagaccctggccaagtacctcgtggaccagaagagcctcaagaacatcgcc
ttcatcagcaacaacggctcctacggcaagggcgagcacgacgcgttcggcaaggcgctg
gccgaccgggggatcaagccggtcgacgaccaggtggtcaccaccgaccagaaggacttc
agcgcggcgctgacctccatccgccagaagaacccgcaggtgctgttcgtcgggaccgag
gaagtcgaagccgggctgatcgtcaagcaggcccacgaactcgggctcaacaccaccgtg
gccggcgccgcacccatgggcaccaccgtctacctccagaccgcgggtgccgccaacgcc
gaggggacggtggtgagcagcccctacctcagcaacgacaccagcgacgcatcccgcgcc
ttcgcccaggcctacaaagcggcctacaacgaggacgccgagctgcacggggcgaagtcc
tacgacggcacgaacatcttcctcaccgcgatgaaggacagcaacgcggcaaccggcttg
caactggccgacaagatccgggccacccagtaccccggcctgctcggcacgttcgccttc
gaccagagcggcgtcggcatccacgccacctcgatcggcgtcatcaccggcgggaaactc
atcgccactcccaccagctga
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