Amycolatopsis rhabdoformis: VSH64_09010
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Entry
VSH64_09010 CDS
T09694
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VSH64_09010
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
VSH64_09010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arhd02000
]
VSH64_09010
Transporters [BR:
arhd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
VSH64_09010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
PAS_4
Motif
Other DBs
NCBI-ProteinID:
WSE32247
LinkDB
All DBs
Position
complement(1924200..1925282)
Genome browser
AA seq
360 aa
AA seq
DB search
MTATAACTGSTDAAPAATAETAACRKQADEFLAPYTRPAETLPPQLTALARRPEPGGSVI
QISNGSLPQDVTTANATVAAAHTIGWAGKVLITDGSVEDLNAKWQQAIAEHPTAIIGSTS
SDPIRTALSSARRAGILTALNAASDPPDDRTGPDVVNNGSTEYAHLGEVNAYTVLRDAGC
VPTGVVVVSLQFPVLQAEADKFKETLLAHCPKCEVTVKTLQNGDVGTPAATGSIVSTLQA
DPSTKYVYALIGSLGVGVPAALQAAGMTDVKVFGAQPDSTAVQAVVSGSAAWWLSQENSE
IAGWFLLDGVLRAKESGKPHNEVASTPTILTRDTVPADAQDPPIHPADYVALFTRLWRVG
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgactgcggcctgtaccggctccaccgacgcggcgcccgccgcgaccgcggaa
accgcggcctgtcgcaagcaggcggacgagttcctggcgccctacacccgaccggccgag
accctgccgccgcaactgaccgcgctggcccggcggcccgagccgggcggcagcgtcatc
cagatctcgaacggcagcctcccgcaggacgtgaccaccgccaacgccacggtcgcggcg
gcgcacacgatcggctgggccggcaaggtcctcatcaccgacggttcggtcgaggacctc
aacgcgaagtggcagcaggccatcgccgagcacccgaccgcgatcatcggctccacttcc
agcgacccgatcaggaccgcgctctcgagcgcgcgccgagcgggcatcctcaccgcgctc
aacgcggcgtcggacccgccggacgaccggaccggacccgacgtcgtgaacaacggcagc
accgaatacgcccacctcggcgaggtgaacgcctacaccgtgctgcgcgacgccgggtgc
gtgccgaccggcgtggtggtggtgagccttcagtttcccgtgctgcaggccgaagccgac
aagttcaaggagactctgctggcgcactgcccgaagtgcgaggtcaccgtgaagaccctg
cagaacggcgacgtcggcacccccgccgccaccggctccatcgtgtcgacgctgcaggct
gacccctcgacgaagtacgtctacgcgctgatcggctcgctcggcgtcggcgttcccgcg
gcgctgcaggccgccggaatgaccgacgtcaaggtgttcggcgcccagcccgactcgacc
gccgtccaggccgtggtgtcgggctcggcggcgtggtggctgtcgcaggagaactcggag
atcgccggctggttcctgctcgacggggtgctgcgggcgaaggagtccggcaaaccccac
aacgaggtggcgagcacacccaccattctgacccgcgacaccgttccggcggatgcgcag
gacccgccgatccacccggccgactacgtcgcgctcttcaccaggctctggcgcgtcggc
tga
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