Amycolatopsis rhabdoformis: VSH64_09095
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Entry
VSH64_09095 CDS
T09694
Name
(GenBank) WD40 repeat domain-containing protein
Organism
arhd
Amycolatopsis rhabdoformis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
NBCH_WD40
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_NWD2_C
WD_LRWD1
Motif
Other DBs
NCBI-ProteinID:
WSE32264
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Position
complement(1944498..1946207)
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AA seq
569 aa
AA seq
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MDLEAALIADFTDPLTPARRRRKTALSLASFGSPAALRTLAMALAAGTDRRTAAIAERAF
APGAGVVAAEALSEALVETGSPRLTTLAAASVNDLPEPGARALVHFLAGKFDRYDEYDPG
GDELRTLHDLAGDRLRILLAERARAGHRVDWALVATREPHRMIDPEWQAAVEVLASAERW
PSLWDLLPHATPVHGLRIVTALANAGWQPSGDRARRALAELGPLARECAVDAETGALALA
PVVLTQHPAWVTGLAVTADSALLVSGDYDGGVRLWQLPSGTPAGTLDAGPGLWSLAVTPD
GSLLATGEHRGPVWLWRLPSREQIGPISGAGFGTASLTVSPDGRLLIGGSSDTKVCVWKL
PDGAPAKPLTGHEGGVWSVTVSPDGKLLATGDDHRTVRLWELPAGTPAGTLSSSHGGVVT
ALVTTPDGKAVISADSGMTARVSPILERPGEVRVLLAESHLWSLAVSPDGGLLAGGEQRG
TVRLWHLPGGEPAGVLRGHRGPVRELAITPDGSTLITGGKDGTVRLWPLALLRASRTPAT
DIDVDRLPPDTPATAFVAALARHARSRTS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggacctcgaagccgcgctgatcgccgacttcacggacccgcttaccccggcccgtcga
cggcgcaagaccgcgctcagcctcgcgtccttcggctcgccggccgcactgcgcactctc
gcgatggccttggccgcgggcacggaccgcaggacggcggcgatcgccgaacgcgccttc
gcgccgggcgccggcgtcgttgccgcggaggcgctgagcgaagctctcgtcgaaaccggc
agcccgcggctgaccaccctggccgcggcctcggtgaacgacctgccggagccgggcgcc
cgcgccctcgtccacttcttggcggggaagttcgaccggtacgacgagtacgaccccggc
ggggacgagctgaggaccctgcacgacctggccggtgaccggttgcggatcctgctcgcc
gaacgcgctcgcgccggccaccgcgtcgactgggccctcgttgccactcgcgagccccac
cgcatgatcgatccggagtggcaggccgccgtcgaggtcctcgcctccgccgagcgctgg
ccgtcgttatgggacctactcccgcacgcgaccccggtgcacggcctgcggatcgtgacc
gcgctggcgaacgccggctggcagcccagcggtgatcgcgcgcgccgcgcgctggccgaa
ctcggcccgttggcccgcgaatgcgcggtcgacgccgagacgggcgcgctcgcgctcgcg
ccggtggtgctgacccaacacccggcctgggtgaccgggctcgccgtcaccgccgacagc
gccctgctggtgagcggcgactacgacggtggggtgcggctgtggcagctgccctcgggc
acgccggccggcacgctggacgcgggcccggggctgtggagcctcgcggtgaccccggac
ggaagcctgctggccacgggcgagcaccgcgggcccgtgtggctgtggcggctgccctcg
cgcgaacagatcggccccatctccggcgccgggttcggcaccgccagcctgaccgtaagc
ccggacggccgcctgctgatcggcggcagctcggacaccaaggtctgcgtctggaagctt
ccggacggcgcccccgccaagccgctgaccggccacgaaggcggcgtgtggtccgtgacc
gtctcaccggacggcaagctcctggcgaccggggacgaccaccgcaccgtccggctttgg
gagctgcccgccggaacaccggccggaacgctgtcgtcgtcgcatgggggcgtggtcacg
gcactggtgaccaccccggatggcaaggcggtgatcagcgcggacagcggtatgaccgcc
cgcgtgtcacccatcctggaaaggccgggcgaggtccgggtgctgctcgccgagagccat
ttgtggtccttggccgtctccccggacggcggcctcctggccggcggcgaacaacgcggc
acggtccgcctctggcacctcccgggcggcgaacccgccggggtcttgcgcggccaccgc
ggcccggtccgcgaactggcgatcacccccgacggatcaaccctgatcaccggcggcaag
gacggaacggtccgcctgtggccgctggcactgctgagggcaagccggaccccggccacg
gacatcgacgtcgaccgcctgcccccggacacgcccgcgacagccttcgtcgccgccctc
gcgcggcacgcccgcagccgcacctcgtga
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