Amycolatopsis rhabdoformis: VSH64_09865
Help
Entry
VSH64_09865 CDS
T09694
Name
(GenBank) hypothetical protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VSH64_09865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arhd03400
]
VSH64_09865
Enzymes [BR:
arhd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
VSH64_09865
DNA repair and recombination proteins [BR:
arhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VSH64_09865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
WSE32408
LinkDB
All DBs
Position
2112693..2113382
Genome browser
AA seq
229 aa
AA seq
DB search
MKLGLHARDLPVLVGTGVTEAELAYGHLVERDPVLCRLVHRFGRPEPFSRREEAGLGDHF
SALVRYCGARQFRAPSVSPVYAQICRASGGHPSPAVVAELGAGRLTALGVPCADADRLVR
LARAQLAGDLDLDLLAGRNDHQVREILARYGIPREMADLFLIRRLHRPDVLPVDDPVLAP
VIRRIWAGGSAGEGFGRQWAPFRTYAAALLWEVAQAGPPPGGGKLRGQR
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcggtctgcacgctcgggacctgcccgtgttggtcggaaccggcgtcacggag
gcggaactcgcctacggccacctggtggagcgcgacccggtcctgtgccgcctcgttcac
cggttcggccggccggagccgttcagccgccgggaggaagccgggctcggcgaccatttc
tccgcgctggtccgctactgcggcgcgcggcagttccgcgcgccgtcggtttccccggtg
tacgcccagatctgccgtgcgtcgggtggccacccctcgcccgcggtggtcgccgagctc
ggcgccggccggctgaccgcgctgggggtgccgtgcgcggacgccgatcggctcgtgcgg
ctggcgcgggcgcagctggccggtgacctcgatctcgacctgctcgccgggcgcaacgac
caccaggtccgggagatcctcgcgcggtacgggattcctcgggagatggcggatctgttc
ctgatccgtcgcctgcaccggcccgacgtgctgccggtcgacgacccggtgctcgccccg
gtgatccggcggatctgggcgggcggcagcgccggcgaagggttcgggcggcagtgggcg
ccgtttcgcacctatgccgcggcgctgctgtgggaggtggcgcaggcgggcccgccaccg
ggcggcgggaagctccgaggtcagcggtaa
DBGET
integrated database retrieval system
