Amycolatopsis rhabdoformis: VSH64_12285
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Entry
VSH64_12285 CDS
T09694
Name
(GenBank) extracellular solute-binding protein
KO
K10240
cellobiose transport system substrate-binding protein
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VSH64_12285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arhd02000
]
VSH64_12285
Transporters [BR:
arhd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Cellobiose transporter
VSH64_12285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
UCR_Fe-S_N
Motif
Other DBs
NCBI-ProteinID:
WSE32884
UniProt:
A0ABZ1IH60
LinkDB
All DBs
Position
complement(2628082..2629371)
Genome browser
AA seq
429 aa
AA seq
DB search
MTLTRRRFLTGAAALGAAAFGAGACTSPTTANPGRITLWYTSNGLSDTVLGEAVKRFAAD
KLTPSQVSGELKQRLLAALAGEAYLPDITMLGDDIATYFADTDHFVDLNTLGAGSVRDEY
LPWKWQAGASPEGFQLGFPVDVGPAALYYRHDLFTQAGFPGEPDDVAAATATWDDYFTFG
TKLQKKLPGRYLITDTKTVFTYSLAQEPRKYFDRANHYLDDQSQVRRAWDRAVQAFRMGL
TAGYAGSQSVNGQSIDRHAAWNSGKELSFVNASWITGELKESAPGTSGKWRVCRPPGGAG
NQGGSFLAITKYCPDPHAAFEIVKWLQSPQIQPQNYLELGLFPPSPSAYSDPRLLAPEPF
FGGQVTMDVFSTIARDVKPVYFSPWDISISDTYTDELTNVESAGKDPEQAWRDARAAVER
LLRRQGVLS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgactcgacgacggttcctgaccggcgcggcggcactcggcgccgcggcgttc
ggggcaggcgcctgcaccagtcccaccaccgcgaacccggggcggatcacgctctggtac
acctcgaacggcctgtccgacaccgtgctcggcgaggccgtgaagcgcttcgccgccgac
aagctgaccccttcgcaggtcagcggcgaactgaagcagcggctgctcgccgcactggcc
ggcgaggcctacctgcccgacatcaccatgctcggcgacgacatcgccacgtacttcgcc
gacaccgatcacttcgtcgacctgaacaccctcggcgcgggcagcgtgcgcgacgagtac
ctgccctggaagtggcaggccggcgcgagccccgaggggttccagctcgggttcccggtc
gacgtcggcccggccgccctgtactaccgccacgacctgttcacccaggccgggttcccc
ggcgagcccgacgacgtggccgcggcgacggccacgtgggacgactacttcacgttcggc
acgaagctgcagaagaagctgcccgggcggtacctgatcaccgacaccaagacggtgttc
acgtactcgctcgcgcaggagccgcgcaagtacttcgaccgcgccaaccactacctcgac
gaccagtcgcaggtgcgccgcgcgtgggaccgggccgtgcaggcgttccggatgggcctc
accgccgggtacgcgggttcgcagagcgtgaacggccagtcgatcgaccggcacgcggcc
tggaacagcggcaaggagctcagcttcgtcaacgcgtcctggatcaccggcgagctcaag
gaatcggcgccgggcacctcgggcaagtggcgcgtgtgccggccgcctggcggcgcgggc
aaccagggcggttcgttcctcgcgatcacgaagtactgccccgacccgcacgccgcgttc
gagatcgtgaagtggctgcagtcgccgcagatccagccccagaactacctggagctcggg
ctcttcccgcccagcccgtcggcctactcggatccgcggctgctcgcgcccgagccgttc
ttcggcggccaggtgacgatggacgtgttctcgacgatcgcccgggacgtcaagcccgtg
tacttcagcccgtgggacatctcgatcagcgacacctacaccgacgaactgaccaatgtg
gaaagcgccggcaaggatcccgaacaggcgtggcgtgatgcccgcgccgcggtggaacgc
ctgctgcgccgccagggggtgctctcgtga
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