Amycolatopsis rhabdoformis: VSH64_13230
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Entry
VSH64_13230 CDS
T09694
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
arhd03051
]
VSH64_13230 (pafA)
Enzymes [BR:
arhd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
VSH64_13230 (pafA)
Proteasome [BR:
arhd03051
]
Prokaryotic proteasome
Bacterial regulatory particles
VSH64_13230 (pafA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
DUF5674
Motif
Other DBs
NCBI-ProteinID:
WSE33066
UniProt:
A0ABZ1IG53
LinkDB
All DBs
Position
complement(2936318..2937676)
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AA seq
452 aa
AA seq
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MQRRIFGIETEYGVTCTFHGQRRLSPDEVARYLFRRVVSWGRSSNVFLSNGSRLYLDVGS
HPEYATAECDDLAQLVTHDKAGERILEDLLVDAERRLADEGIGGDIFLFKNNTDSAGNSY
GCHENYLVTRAGEFSRIADVLLPFLVTRQLICGAGKVLQTPRGAVYCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMAEPTTMLKIGSANLVLEMIEAGVQF
RDFTLDNPIRAIREISHDLTGRRQVRLAGGREASALDIQREYHARAVQHLKENGSTPANE
RVVELWGRALEAVEQQDFAKIDTEIDWAIKHRLVERYRAKHDLDLSSPRIAQLDLAYHDI
RRGRGIFDLLQRKGLVKRVTDDGEIEAAKDTPPQTTRAKLRGDFIAAAQAAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVERLISSL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcggatctttggcatcgagaccgagtacggggtcacgtgcaccttccacggt
cagcgcaggctctcgcccgacgaggtcgcgcggtatctgttccggcgggtcgtgtcttgg
ggacgctcgtcgaacgtgttcctctccaacggctcccggctctacctcgacgtgggctcg
cacccggagtacgcgacggccgagtgtgacgacctcgcgcagctggtgacccacgacaag
gccggtgagcggatcctcgaggacctgctcgtcgacgccgagcgccggctggccgacgag
ggcatcggcggcgacatcttcctgttcaagaacaacaccgactccgccggcaactcctac
ggctgccacgagaactacctcgtgacccgcgcgggcgagttctcccggatcgcggacgtg
ctgctgccgttcctggtcacgcgccagctgatctgcggcgcgggcaaggtcctgcagacc
ccgcgcggcgccgtgtactgcctgtcgcagcgcgccgagcacatctgggaaggcgtctcc
agcgccaccacccgctcgcgcccgatcatcaacacccgcgacgagccccacgccgacgcc
gagcgctaccggcgcctgcacgtgatcgtgggcgactcgaacatggccgagcccaccacg
atgctcaagatcgggtcggcgaacctggtcctcgagatgatcgaggccggcgtgcagttc
cgcgacttcaccctcgacaacccgatccgggcgatccgcgagatcagccacgacctcacc
ggccgccgccaggtgcgcctcgccggcgggcgcgaggcctcggcgctcgacatccagcgc
gagtaccacgcccgcgcggtgcagcacctgaaggagaacggctcgaccccggccaacgag
cgcgtggtcgagctgtggggccgcgcgctggaggcggtcgagcagcaggacttcgcgaag
atcgacaccgagatcgactgggccatcaagcaccgcctggtcgagcgctaccgcgcgaag
cacgacctggacctgtccagcccccgcatcgcgcagctcgacctggcctatcacgacatc
cgccgcggccggggcatcttcgacctgctgcagcgcaagggcctggtcaagcgcgtgacc
gacgacggcgagatcgaagccgccaaggacaccccgccccagaccacccgcgcgaagctg
cgcggcgacttcatcgccgccgcccaggccgccggacgcgacttcaccgtcgactgggtc
cacctcaagctcaacgaccaggcccagcgcaccgtgctgtgcaaggacccgttccgctcg
gtcgacgagcgcgtggagcgcctgatcagctcgctgtag
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