Amycolatopsis rhabdoformis: VSH64_14830
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Entry
VSH64_14830 CDS
T09694
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arhd03000
]
VSH64_14830
Transcription factors [BR:
arhd03000
]
Prokaryotic type
Helix-turn-helix
Other families
VSH64_14830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_14
HTH_8
GAF
HTH_50
HTH_30
Sigma54_activ_2
HTH_29
HTH_22
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
WSE33374
UniProt:
A0ABZ1IG42
LinkDB
All DBs
Position
complement(3281075..3282856)
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AA seq
593 aa
AA seq
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MTDAGASISSPDRLANAREQFLSTEQVDAESVRKTILASWWRSRTHRVAADHVKTPYVAD
PDLETPLLQSAGAVLDALEDKLSDLAVSVVLTDDQALVLDRRTEDRALERYLDGVQLARG
FSYAEEFVGTNGIGTALEGRQPTAVFGHEHYAENLDTLACAGVPIRHPISGQVLGLLDLT
CWKKDAGPLLLALAKATAHDIETELTNQVGLRELSLFSAYLRACRRGQGIVLAVNNDLVM
LNDHARQLLVPEDQAALLARAVEALSSQSDRSLSMDLPSGARARLSYTPVSSDVGPAGGV
VRARLLQEPEVVSARTDSRQPVLPGIVGTGALWARACLSVGRFARDRKWTVVEGEPGSGK
LAVARAAHSGSTAGAPCEVVELDGLGPGEWETPVRRALRKGPGTVVFRHLDKLSQAEQRA
LAAVLDEARLDASVWGVATVTEGEQDGLDTDLMRHFPTSVTVPPLRHHIEDVRVLVPFLL
AQLGKGPLLHCSPAALQLLLRNEWPGNVAQLRQVLRKVVHTRRAGVIEPEDLPPECRTVV
KRVLNPLESLERDAIVRSLLDADGNKSRAAGSLGMSRATIYRKIRDYGIDIPS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgacgcaggcgcctccatttcgtcgccggaccggctggcgaacgccagggagcag
ttcctgtccacggagcaggtcgacgcggaaagcgtccgcaagacgatcctcgcttcgtgg
tggcgatcccggacgcaccgggtcgccgccgatcacgtgaaaaccccctacgtggccgat
cccgacctcgagacgccgctgctgcagagcgccggcgcggtgctcgacgcgctggaggac
aagctcagcgacctcgccgtgagcgtggtgctgaccgacgaccaggccctggtgctcgac
cgccgcacggaggaccgtgcgctcgagcgctacctcgacggtgtgcagctggcccgcggg
ttcagctacgccgaggagttcgtgggcacgaacgggatcggcacggccctggaagggcgg
cagccgaccgcggtgttcggccacgagcactacgcggagaacctcgacacgctcgcgtgc
gccggcgtgcccatccgccacccgatctcgggccaggtcctcgggctgctcgacctcacc
tgctggaagaaggacgccggcccgctgctgctggccctggccaaggcgaccgcccacgac
atcgagaccgagctgaccaaccaggtcggcctgcgcgagctgagcctgttctcggcctac
ctgcgggcctgccggcgcggccagggcatcgtgctcgcggtcaacaacgacctggtgatg
ctcaacgaccacgcccgccagctgctcgtgcccgaggaccaggccgcgctgctggccagg
gccgtggaggcgctgagctcgcagtcggaccgctcgctgtcgatggacctgcccagcggg
gcccgcgcgcggctgtcgtacaccccggtctcgagcgacgtcggcccggccggtggcgtg
gtgcgggcccggttgctgcaggaacccgaggtggtgtccgcccgcaccgactcgcgccag
cccgtgctgcccggcatcgtcggcaccggggcgctgtgggcgcgggcgtgtctctcggtc
ggccgcttcgcgcgggaccgcaagtggaccgtggtcgagggtgaacccggcagcggcaag
ctcgccgtggcccgcgccgcgcactcgggctccacggccggcgcgccgtgcgaggtcgtg
gagctcgacggactcgggccgggggagtgggagacgccggtgcggcgggcgctgcgcaag
ggcccgggcacggtggtgttccgccacctggacaagctttcgcaggccgagcagcgcgca
ctggccgcggtgctcgacgaggcgcgcctcgacgcgagcgtgtggggcgtcgcgaccgtg
acggagggcgagcaggacggcctcgacaccgacctgatgcgccacttcccgacgtcggtc
accgtgccgccgctgcgtcaccacatcgaggacgtgcgcgtgctcgtgccgttcctgctc
gcgcagctcggcaagggcccgctgctgcactgctcgccggccgcgctgcagttgctgctg
cgcaatgaatggccgggcaacgtcgcccagctgcggcaggtgctgcgcaaggtcgtgcac
acgcgccgcgccggcgtgatcgagccggaggacctgccgccggagtgccgcaccgtcgtc
aagcgcgtgctcaacccgctggagtcgctggagcgcgacgccatcgtgcgcagcctgctg
gacgccgacggcaacaagtcccgcgcggccggttccctcggcatgtcgcgggccaccatc
taccgcaagatccgggactacggcatcgacatcccgtcgtga
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