Amycolatopsis rhabdoformis: VSH64_15310
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Entry
VSH64_15310 CDS
T09694
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VSH64_15310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arhd02000
]
VSH64_15310
Transporters [BR:
arhd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VSH64_15310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
Zeta_toxin
AAA_29
AAA_30
AAA_22
FtsK_SpoIIIE
RsgA_GTPase
AAA_19
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WSE33463
LinkDB
All DBs
Position
3377283..3379016
Genome browser
AA seq
577 aa
AA seq
DB search
MLIRLLRSHLRPYRATIWLVIVLQLVQTIAALYLPTLNADIVDNGLVKGDTGYIMRVGGM
MLLITLVQIAGSVGAVYFGARTAMSLGRDVRASVFHRVQDFSAREVGQFGTPSLITRTTN
DVQQIQMLVLMTLTLMVSAPIMCVGGIVLALNQDVPLSSLLLVIVPVLAIAVGIIIARMR
PAFRLMQVRIDKINQVMREQIMGIRVIRAFVRDKRERERFGQANDELLAVSLKVGRLMAL
MFPTVMLVVNVSSVAVLWFGGHRIESGDMMIGALTAFLAYLLQILMSVMMATFMFMMVPR
AEVSAERISEVLDTESSVRPPLKPVSPGRVHGTLELTGVEFCYPGAEKAVLRDISLIARP
GETTAVIGSTGSGKTTLLNLVPRLMDATAGTVRVDGIDVRELDPVLLAKAVGMVPQKPYL
FAGTVASNLRYGNPDATDEDLWHALEVAQGKDFVERMPEGLAAPIAQGGTNVSGGQRQRL
AIARMLVHKPEIYLFDDSFSALDYATDAALRRALTDETRDATVVIVAQRVSTIRGADRIV
VLDDGQVVGSGTHHELMDGNETYREIVLSQLTEQEAA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatccgcctgttgcgcagtcatctgcgcccctaccgcgccaccatctggctggtg
atcgtgctgcaactggtgcagacgatcgccgcgctgtacctgcccacgctcaacgccgac
atcgtcgacaacgggctggtgaagggcgacaccgggtacatcatgcgggtcggcggcatg
atgctgctgatcacgctggtgcagatcgccggttcggtcggcgccgtctacttcggtgcg
cgcaccgccatgtcgctgggccgcgacgtgcgcgcctcggtgttccaccgggtgcaggac
ttctcggcccgcgaggtcggccagttcggcacgccctcgctcatcacccgcaccaccaac
gacgtgcagcagatccagatgctggtgctgatgacgctcacgctcatggtgtcggcgccg
atcatgtgcgtcggcggcatcgtgctggcgctgaaccaggacgtgccgctctcgtcgctg
ctgctggtgatcgtgcccgtgctggccatcgccgtcggcatcatcatcgcgcgcatgcgc
ccggcgttccggctcatgcaggtgcgcatcgacaagatcaaccaggtgatgcgcgagcag
atcatgggcatccgcgtgatccgcgccttcgtgcgcgacaagcgcgagcgcgagcggttc
ggccaggccaacgacgagctgctcgcggtgtcgctgaaggtcggccgcctgatggcgctg
atgttccccacggtgatgctggtggtcaacgtctcgagcgtcgccgtgctgtggttcggc
gggcaccgcatcgagagcggcgacatgatgatcggggcgctcaccgcgttcctggcctac
ctgctgcagatcctgatgtcggtcatgatggccacgttcatgttcatgatggtgccgcgc
gccgaggtgagcgccgagcgcatctccgaggtgctggacaccgagtcgagcgtgcgcccg
ccgctgaagccggtctcccccggccgcgtgcacggcacgctggagctgaccggcgtcgag
ttctgctaccccggcgcggagaaggcggtgctgcgcgacatctcgctgatcgcgcggccc
ggtgagaccaccgcggtgatcggcagcaccggcagcggcaagaccacgctgctgaacctc
gtgccgcggctgatggacgccaccgccggcaccgtgcgagtggacggcatcgacgtgcgg
gagctggacccggtcctgctggccaaggccgtggggatggtgccgcagaagccgtacctg
ttcgccggcaccgtggccagcaacctgcgctacggcaacccggacgccaccgacgaggac
ctctggcacgcgctggaagtggcgcagggcaaggacttcgtggagcgcatgcccgaaggg
ctcgccgcaccgatcgcccagggcggcaccaacgtgtcgggcggccagcgccagcggctc
gcgatcgcgcggatgctggtgcacaaaccggagatctacctgttcgacgactcgttcagc
gccttggactacgcgaccgacgcggccctgcgccgcgcgctgaccgacgaaacccgcgac
gcgacggtggtcatcgtcgcgcagcgcgtgagcaccatccgcggcgccgaccggatcgtc
gtgctcgacgacggccaggtcgtgggcagcggaacccaccacgaactgatggacggcaac
gaaacgtatcgcgagatcgtgctttcgcagctgaccgagcaggaggcagcgtga
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