Amycolatopsis rhabdoformis: VSH64_15470
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Entry
VSH64_15470 CDS
T09694
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00750
Vitamin B6 metabolism
arhd01100
Metabolic pathways
arhd01240
Biosynthesis of cofactors
Module
arhd_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
VSH64_15470 (pdxS)
Enzymes [BR:
arhd01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
VSH64_15470 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
NMO
IGPS
TetR_C_27
DHO_dh
Glu_synthase
Motif
Other DBs
NCBI-ProteinID:
WSE33493
UniProt:
A0ABZ1IH79
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All DBs
Position
3412236..3413150
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AA seq
304 aa
AA seq
DB search
MSEQQSTPETQSVTGTAKVKRGMAEMLKGGVIMDVVTAEQAKIAEDAGAVAVMALERVPA
DIRAQGGVARMSDPDLIDGIIEAVSIPVMAKARIGHFVEAQVLQSLGVDYIDESEVLTPA
DYANHIDKWAFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNATTHMRQIRAE
IRKLTSLPEDELFVAAKELQAPYELVKEVAANGKLPVVLFTAGGIATPADAAMMMQLGAE
GVFVGSGIFKSGNPAQRAQAIVKATTFYDDPDMVAKFSRGLGEAMVGINVEELPEPHRLA
ERGW
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgagcagcagtccactcccgaaacccagtccgtcaccggcaccgccaaggtcaag
cgcggcatggcggagatgctcaagggcggggtgatcatggacgtggtcaccgccgagcag
gcgaagatcgccgaggacgccggcgcggtcgcggtgatggcgctcgagcgcgtgcccgcc
gacatccgcgcgcagggcggcgtggcccgcatgagcgacccggacctgatcgacggcatc
atcgaggccgtctcgatcccggtcatggcgaaggcccgcatcggccacttcgtcgaggcg
caggtgctgcagtcgctcggcgtcgactacatcgacgagtccgaggtcctcaccccggcc
gactacgccaaccacatcgacaagtgggccttcaccgtccccttcgtctgcggcgcgacc
aacctcggcgaggccctgcgccgcatcaccgagggcgcggccatgatccgctccaagggc
gaggccggcaccggcgacgtctccaacgccaccacccacatgcgccagatccgcgccgag
atccgcaagctgacctcgctgcccgaggacgagctgtttgtggcggccaaggagctgcag
gcgccgtacgagctggtcaaggaggtcgcggccaacggcaagctgccggtggtcctcttc
accgccggcggcatcgccaccccggccgacgcggccatgatgatgcaactcggcgccgaa
ggcgtgttcgtgggctcgggcatcttcaagtccggcaaccccgcccagcgcgcccaggcc
atcgtcaaggccaccaccttctacgacgaccccgacatggtcgccaagttctcgcgcggt
cttggtgaggccatggtgggcatcaacgtcgaagagctgccggaaccgcaccgcctcgcc
gagcgcggctggtga
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