Amycolatopsis rhabdoformis: VSH64_16465
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Entry
VSH64_16465 CDS
T09694
Name
(GenBank) IclR family transcriptional regulator
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arhd03000
]
VSH64_16465
Transcription factors [BR:
arhd03000
]
Prokaryotic type
Helix-turn-helix
IclR family
VSH64_16465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR
TrmB
HTH_24
MarR_2
RP-C
HTH_AsnC-type
Dimerisation
HTH_PafC
Rrf2
DprA_WH
HTH_20
HTH_36
HTH_5
HTH_Crp_2
DUF2250
HTH_27
HTH_Cmi2_C
HTH_6
Motif
Other DBs
NCBI-ProteinID:
WSE33680
LinkDB
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Position
3615601..3616332
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AA seq
243 aa
AA seq
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MSEVQSVQRTFVILERLAEHGPSGIQQLARDCGLPPATVQRLTRALVTAGLVEQDSDRTY
RVTWQLFRWAQAPLARLGLRELAKPFMQELAAEVEETIVLGVRDGDAVLHVEWIPARHLV
QPRVRIGERVPLGESSLGRCLLAWPDDPGAEPPPELHRPLATVRELGYALVEDTTAGIRT
LAVPIRRGEVSVAAAIGVGGPMNRFSAERAASAVPSLLAVGRAVSAHFGAEPAYGRTRLD
GAG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaagtccaatcggtacaacgcaccttcgtcattctcgaacgactggcggaacac
ggtcccagcggaatccagcaattggcgcgggattgcgggctgccacccgccacggtccag
cggttgacgcgcgcgttggtcacggcgggactcgtcgaacaggactcggatcgcacttac
cgcgtgacctggcagctgttccggtgggcgcaggcgccgctggcccggctcggcttgcgc
gagctcgccaaaccgttcatgcaggagctcgccgccgaggtggaggagacgatcgtgctc
ggcgtgcgcgacggcgacgccgtgttgcacgtggagtggatcccggcgcgccacctcgtg
cagccgcgggtgcggatcggtgaacgcgtgccgctgggcgagtcttccctcggccgctgt
ctgctcgcgtggccggacgatcccggcgccgaaccacccccggagctgcaccgtccactc
gcgacggtgcgcgaactgggctacgcgctcgtcgaggacacgacggcgggcatccggacc
ctcgccgtgccgatccggcgcggcgaggtgtcggtggccgcggccatcggcgtcggcggc
ccgatgaaccgcttctcggccgagcgggccgcgtccgcggtcccctcgctcctcgcggtc
gggcgcgccgtgagcgcccacttcggcgcggaacccgcgtacggacgaactcgactggac
ggagccggctga
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