Amycolatopsis rhabdoformis: VSH64_16805
Help
Entry
VSH64_16805 CDS
T09694
Name
(GenBank) RraA family protein
KO
K10218
4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:
4.1.3.17
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00362
Benzoate degradation
arhd00660
C5-Branched dibasic acid metabolism
arhd01100
Metabolic pathways
arhd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
VSH64_16805
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VSH64_16805
Enzymes [BR:
arhd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.17 4-hydroxy-4-methyl-2-oxoglutarate aldolase
VSH64_16805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RraA-like
Motif
Other DBs
NCBI-ProteinID:
WSE33747
UniProt:
A0ABZ1IH81
LinkDB
All DBs
Position
3680859..3681476
Genome browser
AA seq
205 aa
AA seq
DB search
MPDGFPDIPTTTLADLLTRDQVMDLGVRPLWGPVPQVSGPAYTVRCPAGDNLMLHAAIHR
APAGSIVVVESGDLDYALAGGNVCAVAQRNGIAAFVLDGVIRDLAEVRELRFPVFARGLI
PIPGTKAAAAPLGEPVRCGGVTVHAGDIVTADEEGVVVTPAADAERVLVEARERLAKEAA
QTLDEWDADHAAKIDRILKAQGFEG
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacggattccccgacatccccaccaccacgctcgccgacctgctcacccgcgac
caggtcatggacctcggtgtgcgccccctgtggggcccggtgccgcaggtctccggcccg
gcctacaccgtgcggtgcccggcgggcgacaacctgatgctgcacgcggccatccaccgc
gccccggccggctcgatcgtcgtggttgagtccggtgacctggactacgcgctggcgggc
ggcaacgtctgcgccgtggcgcagcgcaacgggatcgccgcgttcgtgctcgacggcgtg
atccgcgacctggccgaggtgcgcgagctgcgcttcccggtgttcgcgcgcggcctgatc
ccgatccccggcaccaaggcggccgcggcgccgctgggcgagcccgtgcgctgcggcggc
gtcaccgtgcacgccggcgacatcgtgaccgccgacgaagagggggtggtcgtcactccc
gccgccgacgcggaacgagtcctggtcgaggcacgggagcggctggccaaggaagcggcg
cagacgctggacgagtgggacgccgaccacgcggcgaagatcgaccggatcctgaaagcg
cagggcttcgagggctga
DBGET
integrated database retrieval system