Amycolatopsis rhabdoformis: VSH64_16910
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Entry
VSH64_16910 CDS
T09694
Name
(GenBank) glycoside hydrolase family 3 N-terminal domain-containing protein
KO
K17641
beta-xylosidase
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99981 Carbohydrate metabolism
VSH64_16910
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3
Glyco_hydro_3_C
Fn3-like
Motif
Other DBs
NCBI-ProteinID:
WSE33768
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Position
3703069..3705381
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AA seq
770 aa
AA seq
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MTTGADRPAEAASEPWRDPRLPVAERVDDLVARLSAREKVAQLSGIWVGMDSGGEVAPHQ
HDFAQDPPDWEALVPHGVGQLTRAFGTRPVDPEIGARGLARTQEEIVARGRFGIPAMVHE
ECLTGLAAWQATVYPAPLCWGASFDPELVRRMAFRIGKTMRALGVHQGLAPVLDVARDLR
WGRVEETIGEDPYLVGTIGAAYVAGLESAGIVATLKHFAGYSASKAGRNLAPVSIGPREF
ADVLLPPFEHALRAGARSVMNAYTDLDGVPAAADPELLTTLLRDRYGFTGTVVADYFSVA
FLHTLHHVATGPQEAARLALAAGIDVELPTVDCYGGPLVAALADGSVDESLVDRALHRVL
TQKVELGLLDPDWSPHPAVTALDDEESRALARELAERSVVLLSNTGALPLRSGVRLAVVG
PRADEPGAMLGCYSFPMHVGVHHPDVPFGLDVPTVAEALRESFDLTFAQGCGVTDGSDED
LAAAVEAAAAADVCVAVLGDRAGLFGGGTSGEGCDAADLRLPGRQEELLEAVLATGTPVV
LVLLSGRPYELSRQVDRLAAVVCGFYPGEEGAAALAGVLTGAVEPSGRLPVSFPAAGATQ
PSTYLAAALAARSDVSSIDPTPVFPFGHGLAYHPATWVSVTGPAAWPADGSCRVSVTLHN
PHDTEISEVVQVYLHDPVAEVARPLRQLIAAPRVALPPGATRVVQLDLHADLTSYTGRAR
DRIVDTGPVELHVGPSSAVAHTVLAVSITGSRRLVGFERVLQPLVTVVPG
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccggagccgaccggcccgccgaggccgcgagcgaaccttggcgcgacccgcgg
ctgccggtcgccgagcgggtggacgacctcgtggcccggctgtccgcgcgggagaaagtg
gcgcagctgtcgggaatctgggtcggcatggactccggcggcgaggtggcgccgcaccag
cacgacttcgcgcaggacccgccggactgggaagcgctcgtgccgcacggtgtcggtcag
ctgacccgcgcgttcggcacccggccggtcgacccggagatcggcgcgcgagggctcgca
cggacccaggaggagatcgtggcccgcgggcgcttcggcatccccgcgatggtgcacgag
gagtgcctcacgggcctcgcggcgtggcaggccacggtgtacccggcgccactgtgctgg
ggcgcgagtttcgacccggagctggtgcggcgcatggctttccgcatcgggaagacgatg
cgtgcgctcggcgtgcaccaggggctggcgccggtactcgacgtggcgcgggacctgcgc
tggggccgggtcgaggagaccatcggcgaggacccgtacctcgtgggcacgatcggcgcg
gcctacgtggccgggctcgagtcggccgggatcgtcgccacgctcaagcacttcgcgggc
tactcggcgtcgaaggccggccgcaacctcgcaccggtctcgatcgggccgcgcgagttc
gccgacgtgctgctgccgccgttcgagcacgccctgcgcgccggagcgcgctcggtgatg
aacgcctacaccgacctcgacggagtgcccgccgcggccgacccggaactgctcaccacg
ctgctgcgcgaccgctacggcttcaccggcaccgtcgtggccgactacttctccgtggcg
ttcctgcacaccctgcaccacgtcgccaccggaccgcaggaggccgcgcggctggcgctg
gccgcgggcatcgacgtcgaactgcccacagtggactgttacggcgggccgctcgtggcc
gcgctggcggacggcagcgtcgacgagtccctggtggaccgcgccctgcaccgcgtgctc
acgcagaaggtggagctgggcctgctggacccggactggtcaccacacccggccgtgacg
gcgctggacgacgaggagtcgcgggcgctcgcccgggagctcgccgagcggtcggtggtg
ctgctgtcgaacaccggagcgttgccgctgcgttccggtgttcggctcgcggtcgtgggt
ccgcgcgcggacgagccgggcgcgatgctcggctgctactcgttcccgatgcacgtcggc
gtgcaccatcccgacgtgccgttcggcctcgacgtcccgacggtcgccgaggcgctgcgg
gagtcgttcgacctcaccttcgcgcagggctgcggcgtcaccgacggttcggacgaggac
ctcgccgcggccgtagaggcggccgcggcggcggacgtctgcgtcgccgtgctcggggac
cgcgcgggtctgttcggcggcggcacgtccggcgaaggctgtgacgcggcggacctgcgg
ctgcccggccggcaggaggaactgctcgaagcggtgctcgccacgggcacgcccgtggtg
ctggtgctgctgtcgggccggccctacgagctgtcgcgccaggtcgatcgcctggcggcc
gtggtgtgcgggttctacccgggcgaagagggcgcggcggcgctcgccggggtgctcacg
ggcgcggtcgagccttcgggccggctgccggtgagcttcccggccgccggggcgacccag
ccgtcgacctacctcgccgcggccctggccgcgcgcagcgacgtgagctcgatcgacccg
acgccggtgttcccgttcggccacggcctcgcctaccacccggccacctgggtttcggtc
accggcccggccgcgtggccggccgacggctcgtgccgggtgagcgtgacgctgcacaat
ccgcacgacacggagatctcggaagtcgtgcaggtctacctccacgaccccgtggccgag
gtcgcgcgtccgctgcggcagctgatcgccgcgccgcgggtggcgctcccgcccggggcg
acgcgcgtggtgcagctggatctccacgcggatctcacgtcgtacaccggccgggcccgc
gaccggatcgtcgacaccgggccggtggagctgcacgtgggcccgtcgagcgccgtcgcg
cacaccgtgctggcggtgtcgatcacgggttcgcgccgcctcgtgggcttcgagcgggtg
ctccagccgctggtcacggtggtgccgggctga
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