Amycolatopsis rhabdoformis: VSH64_17635
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Entry
VSH64_17635 CDS
T09694
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arhd03009
]
VSH64_17635
Enzymes [BR:
arhd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
VSH64_17635
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
VSH64_17635
Ribosome biogenesis [BR:
arhd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VSH64_17635
23S rRNA modification factors
VSH64_17635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_11
Methyltransf_23
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
WSE33903
LinkDB
All DBs
Position
complement(3879673..3880521)
Genome browser
AA seq
282 aa
AA seq
DB search
MPKRARLDAELVRRGLARSRDQASALITGGKVTVRGMVATKPATGVETDAPIVVKDEDDP
GWASRGAHKLLGALDKFGPDGLTVEGRRCLDAGASTGGFTDVLLRCGAATVIAADVGRGL
LDWRLRTDERVVVLDRTNVRNLTPEQLGGQVDLVVGDLSFISLKLVLPALAECAREGADL
VPMVKPQFEVGKDRLGSGGVVRDPELRVQSVLGVIGEAAKLGLALRGVVASPLPGPSGNV
EYFVWLRRQEIQRQDAGGAATGDGTVDGVERLVRTAVQEGPQ
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtgcccaaacgggcccgcctcgacgcggagctggttcgccgcggcctcgcccgctcccgg
gaccaggcctcggccctcatcaccggcggcaaggtcaccgtgcgcggcatggtcgcgacc
aaacccgccaccggtgtcgagaccgacgcgccgatcgtggtgaaggacgaggacgatccc
ggctgggcctcgcgcggcgcgcacaaactgctgggcgccctcgacaagttcggtcccgac
gggctcacggtcgagggccgtcgctgcctcgacgccggcgcttccaccggcgggttcacc
gacgtgctgctgcgctgcggggccgccaccgtgatcgccgccgacgtgggccgcggcctg
ctcgactggcggctgcgcaccgacgagcgcgtggtcgtgctcgaccgcaccaacgtgcgc
aacctgacgcccgagcagctcggcggccaggtcgacctcgtggtgggcgatctctcgttc
atctcgctcaagctcgtgctgcccgcgctcgcggagtgcgcgcgcgaaggcgccgatctc
gtgcccatggtcaagccgcagttcgaggtcggcaaggaccgcctcggcagcggcggcgtg
gtgcgcgatcccgagctgcgcgtgcagtccgtgctcggggtgatcggcgaagcggcgaag
ctcggcctcgcgctgcgcggggtcgtcgccagcccgttgccgggtccttcgggcaacgtc
gagtacttcgtctggttgcggcgccaggagattcagcgtcaggacgcgggcggagccgcc
accggcgatggcactgtggacggtgtcgagcggctcgtgcgaaccgccgtccaggaagga
ccccagtga
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