Amycolatopsis rhabdoformis: VSH64_19245
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Entry
VSH64_19245 CDS
T09694
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VSH64_19245
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
VSH64_19245
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arhd02000
]
VSH64_19245
Transporters [BR:
arhd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
VSH64_19245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
NUP
Motif
Other DBs
NCBI-ProteinID:
WSE34210
LinkDB
All DBs
Position
complement(4230112..4231218)
Genome browser
AA seq
368 aa
AA seq
DB search
MPVHPLRRSLLAGLASLALVTTACTVDDGGSTSAEGKPANANGPAWCGSKQVSLGLADGF
GDNNWRKVTTAEAKAEVAKCASVTSFTYTDGQGNTQKAISDIQGLVAKGTQAIVVFPDAG
QAVLPALRSAHKAGVVTVPYRVNPGGTPGQDYDAFVSTNFEQAGVLWGQWLVKALNGKGK
VLNLGGPAANSQSLDEFKGMQSVLKDHPGIQFVGTTPYEVTNWDAAQTQRVITAALAKNP
EIDAITTDFGAALASSFSAFTSAGRKIPAIATEDANQLACNWQQQKDAGNPFPLFTVSSQ
NAMSRLAIDVAVAKATGGVVPTDLVYPQSAFEDSISGQPHPVTCDKTLPSDAFVSSSLSK
PDQIAALK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaccccctccgccggtcgttgctcgccggcctcgcctccctggccctcgtg
accaccgcgtgcacggtcgacgacggcggttccaccagcgccgaaggcaaaccggccaac
gcgaacggcccggcctggtgtggttcgaagcaggtctcgctcggcctggccgacggcttc
ggcgacaacaactggcgcaaggtcaccaccgccgaggccaaggccgaggtcgcgaagtgc
gccagcgtcacgtcgttcacctacaccgacggacagggcaacacgcagaaggccatctcc
gacatccagggcctcgtcgccaagggcacgcaggcgatcgtggtgttccccgacgccggc
caggccgtgctgccggcgctgcgcagcgcgcacaaggccggtgtggtcaccgtgccctac
cgcgtgaaccccggcggcacgcccggtcaggactacgacgccttcgtgagcacgaacttc
gagcaggccggtgtcctctggggacagtggctggtgaaggcgttgaacggcaagggcaag
gtgctcaacctcggcgggccggccgcgaactcgcagagcctcgacgagttcaagggcatg
cagagcgtgctcaaggaccacccggggatccagttcgtgggcaccacgccctacgaggtg
accaactgggacgccgcgcagacccagcgcgtgatcaccgcggcgctggcgaagaacccg
gagatcgacgcgatcaccaccgacttcggcgccgcgctggccagctcgttctccgcgttc
acctcggccgggcgcaagatcccggcgatcgccaccgaggacgccaaccagctcgcgtgc
aactggcagcagcagaaggacgccggcaacccgttcccgctgttcaccgtctcctcgcag
aacgccatgtcgcgcctcgcgatcgacgtcgcggtggccaaggcgaccggcggagtggtg
ccgacggacctggtgtacccgcagtcggcgttcgaggactcgatctccggccagccgcac
cccgtcacctgcgacaagacgctgccgagcgacgcgttcgtgtccagctcactgtccaag
ccggaccagatcgcggcgctgaagtag
DBGET
integrated database retrieval system
