Amycolatopsis rhabdoformis: VSH64_19925
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Entry
VSH64_19925 CDS
T09694
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VSH64_19925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arhd02000
]
VSH64_19925
Transporters [BR:
arhd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
VSH64_19925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
SMC_N
AAA_29
AAA_22
AAA_16
nSTAND3
nSTAND1
NACHT
AAA_25
DUF87
Mg_chelatase
RsgA_GTPase
AAA_23
NB-ARC
PRK
AAA_33
MeaB
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
WSE34335
LinkDB
All DBs
Position
complement(4357800..4359458)
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AA seq
552 aa
AA seq
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MTTPKTDPTHPRVGPVLEVADLAVTYRSWRGEHPAVRAASLELRAGETVAVVGESGSGKS
TLAHAVLGLLPPGGRVTGGRIHLGGTEITDAAEPVLREIRGRRIGFVPQDPMTSLNPLRR
VGTQVADALVVHGLLDRKDATARAVELLAEAGLREPALRARQYPHELSGGMRQRVLIAIA
SACRPEVLIADEPTSALDVTVQKRILDRIEAISAETGTAVLMITHDLGVAADRADRIVVM
SRGEVVESGPSAQILNRPTQPYTAKLIAAAPGLSGGVPEGTRESGDEDRPLVRVEGLVKE
FRVREPGFRGRGLRAVDGVSFEVQRGHVVGIVGESGSGKSTTARLVMRLERPTAGRILVD
GANIADARGGALRDLRRRIQFVYQSPYGSLSPRLPVGRIIEEPLREFGIGTRRERRERVR
ELLDLVSLPASYAEHRPGELSGGQRQRVAIARALAIQPELVVCDEPVSALDVSVQAQILE
LLTRLHEELSLSLLFISHDLAVVRQLCQDVIVMRAGQVVEAGPTAEVFDHPATDYTRELL
AAIPGRRFAEPA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaccgaaaaccgaccccacccacccgcgcgtcgggccggtgctcgaggtcgcc
gatctcgccgtgacgtaccggagctggcgcggggagcatcccgcggtccgtgccgcgtcc
ctggaactgcgcgccggggagacggtggccgtggtcggggagtccggctcgggcaagagc
acgctggcgcacgcggtgctgggcctgctgccccccggcggccgggtgaccggcggccgg
atccacctgggcggcaccgagatcaccgacgcggccgagcccgtgctgcgcgagatccgc
ggccgccgcatcgggttcgtcccgcaggatccgatgacctcgctcaacccgctgcgccgg
gtcggcacccaggtcgccgacgccctcgtggtccacggcctgctcgaccgcaaggacgcg
accgcgcgcgccgtggaactgctggccgaggccgggctgcgggaaccggccctgcgggcg
cgccagtacccgcacgagctctccggcggcatgcgccagcgcgtgctgatcgcgatcgcg
tcggcgtgccgcccggaagtgctcatcgccgacgagccgaccagcgcgctggacgtgacc
gtgcagaagcgcatcctcgaccgcatcgaggcgatcagtgccgagaccggcaccgcggtc
ctcatgatcacccacgacctcggggtggccgccgaccgcgccgaccggatcgtggtgatg
tcccggggcgaggtcgtggagagcgggccgagcgcgcagatcctgaaccggccgacccag
ccgtacacggcgaagctcatcgccgccgcgcccggcctcagcggcggcgttccggagggc
acccgagagtccggcgacgaggaccggccactggtccgggtcgagggactggtcaaggag
ttccgtgtgcgcgagcccggtttccgcgggcgcggcctgcgcgcggtcgacggcgtgagc
ttcgaggtccagcgcggtcacgtcgtcggcatcgtcggcgagtccggcagcgggaagtcg
acgaccgcgcggctggtgatgcggctggaacgcccgaccgccggtcggatcctggtcgac
ggcgcgaacatcgccgacgcgcgcggcggcgccctgcgggacctgcggcggcgcatccag
ttcgtgtaccagagcccgtacggctcgttgagcccacggctgccggtcggccggatcatc
gaggaaccgttgcgggagttcggaatcggcacgcggcgcgagcgccgggagcgggttcgc
gagctgctggacctggtttcgctgccggcgtcctacgccgagcaccggcccggcgagctg
tccggcgggcagcgccagcgcgtggcgatcgcgcgggcgctggccatccagccggagctg
gtggtgtgcgacgaacccgtgtcggcactggacgtgtccgtgcaggcccagatcctcgag
ctgctcacccggctgcacgaggagctttcgctcagcctgctgttcatctcgcacgacctc
gccgtggtccggcagctgtgccaggacgtgatcgtgatgcgcgccgggcaggtggtcgag
gccggcccgaccgccgaggtcttcgaccacccggcaaccgactacacgcgcgagctgctc
gccgccattccggggcgccggttcgccgagcccgcctga
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