Amycolatopsis rhabdoformis: VSH64_20175
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Entry
VSH64_20175 CDS
T09694
Name
(GenBank) penicillin-binding protein 2
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00550
Peptidoglycan biosynthesis
arhd01100
Metabolic pathways
arhd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VSH64_20175
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VSH64_20175
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
arhd01011
]
VSH64_20175
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arhd03036
]
VSH64_20175
Enzymes [BR:
arhd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VSH64_20175
Peptidoglycan biosynthesis and degradation proteins [BR:
arhd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VSH64_20175
Chromosome and associated proteins [BR:
arhd03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
VSH64_20175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WSE34377
UniProt:
A0ABZ1IJ04
LinkDB
All DBs
Position
complement(4423711..4425630)
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AA seq
639 aa
AA seq
DB search
MVASGASRARAAGSARRTYAAGTRRAVAKRGNGGQRSRFSAVRILLVALMVIAGVKLVQV
QWFEAPTLSAAAERQRSLTIDIPAQRGSIVDRNGNKLAFSVETRTLSVNLRVLHKTMDDY
AKKYPTKGRNFQTEIAAAAKYIAAKVPNLATEQELLTKLNKPQSFTYLVDNVEPSVAADI
VKQFAWIGVENRAMREYPGDTLASNIVGLANWRMEDADVSKHNLHGVVGLEQSRDNDLAG
TPGREIVNTQNGNDNLYLPGSEHVLQAAIPGSDLELTIDSDLQYELQRQLSDYVAQSHAK
GGQAVIMDSRTGEIYALADDKTFNPNDQSTFQDELLNDRAVTTPYEPGSVNKIVTATAAI
DEGIATPESTIAVPGEIKIADRTVHDAWVHGTQNFTTTGIFAKSSNVGTLELAQKIGPDH
YSDMLKKFGIGQRTGLGLPGESPGYVPPRSQWSASTFGNLPIGQGLSMTVVQMAGMYQAI
ANNGVRVPPRIVKAKKNPDGTVVPEPAPKPVQVVSAQTATTVRNMLRAVVQNAKSPNSGT
APSAALEGYQISGKTGTGQQVDPRTKAYSQSLANITFAGILPADHPRFVVGIRLDAPDTT
LPAGHSAGPLFHSIASYLTQRYQIPLSDGPSPEVPLIIP
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggtggcttcgggggcgagccgggcgcgggccgcgggcagcgcccggcgcacctacgcc
gcgggcacgcgccgcgcggtggccaagcgcggcaacggcgggcagcgcagccggttctcg
gccgtgcgcatcctgctggtggcgctcatggtcatcgcgggcgtgaaactcgtgcaggtg
cagtggttcgaggcgcccacgctctcggccgcggccgagcggcagcgcagcctcaccatc
gacatcccggcgcagcgcgggtccattgtggaccgcaacggcaacaagctcgccttcagc
gtggaaacccgcacgctgtcggtgaacctgcgcgtgctgcacaagacgatggacgactac
gcgaagaagtaccccaccaaggggcgcaacttccagaccgagatcgccgccgcggcgaag
tacatcgccgcgaaggtgccgaacctggccaccgagcaggaactgctcacgaagctgaac
aagccgcagtcgttcacctacctcgtggacaacgtcgagccctcggtggccgccgacatc
gtgaagcagttcgcgtggatcggcgtggagaaccgcgcgatgcgcgagtacccgggcgac
acgctggcgtcgaacatcgtcggactcgccaactggcgcatggaagacgccgacgtgtcc
aagcacaacctccacggtgtggtcgggctggagcagtcgcgcgacaacgacctggcgggc
acgccggggcgcgagatcgtgaacacccagaacggcaacgacaacctgtacctgccgggc
tcggaacacgtgctgcaggccgccatccccggttcggacctcgagctcacgatcgactcg
gacctgcagtacgagctgcagcggcagctgagcgactacgtcgcgcagtcgcacgccaag
ggcggccaggccgtgatcatggactcgcggaccggcgagatctacgcgctggccgacgac
aagacgttcaacccgaacgaccagtccacgttccaggacgaactgctcaacgaccgcgcg
gtcaccacgccgtacgaaccgggttcggtgaacaagatcgtcacggccaccgcggcgatc
gacgagggcatcgccacgccggagtcgaccatcgcggtgccgggcgagatcaagatcgcc
gaccgcacggtgcacgacgcgtgggtgcacggcacgcagaacttcaccaccaccggcatc
ttcgccaagtcgtccaacgtcggcacgctcgagctggcgcagaagatcggcccggaccac
tactcggacatgctgaagaagttcggcatcggccagcgcaccggcctcggcctgcccggc
gagagcccgggctacgtgccgccgcgcagccagtggtcggcgagcaccttcggcaacctg
ccgatcggccagggcctctccatgaccgtggtgcagatggccgggatgtaccaggccatc
gccaacaacggcgtgcgcgtgccgccgcggatcgtgaaggcgaagaagaacccggacggc
accgtcgtgcccgagccggcgccgaagccggtgcaggtggtcagcgcgcagaccgccacg
actgtgcgcaacatgctgcgcgcggtggtgcagaacgcgaagagccccaactcgggcacg
gcaccgtcggctgcgctggagggctaccagatctcgggcaagacgggcaccggccagcag
gtcgacccgcgcacgaaggcctacagccagagcctggccaacatcaccttcgccgggatc
ctgcccgccgaccacccgcgcttcgtggtcggcatccgcctcgacgcgcccgacaccacg
ctgccggccgggcactcggcgggcccgctgttccactccatcgcctcgtacctgacgcag
cgctaccagatcccgctgtccgacggcccgtcgccggaggtcccgctcatcatcccgtga
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