Amycolatopsis rhabdoformis: VSH64_22235
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Entry
VSH64_22235 CDS
T09694
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VSH64_22235
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
VSH64_22235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arhd02000
]
VSH64_22235
Transporters [BR:
arhd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
VSH64_22235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_6
Peripla_BP_1
DHDPS
Motif
Other DBs
NCBI-ProteinID:
WSE34765
UniProt:
A0ABZ1IMX3
LinkDB
All DBs
Position
complement(4883096..4884226)
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AA seq
376 aa
AA seq
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MRKRTIVATGLITITAAATLAGCGAGEHDSAATMTDQARAQCVTSAGRLRDSMLKEPALK
MLGAFDITKAEGKSLWIVNAARVPFLQGISDGAAAAAKAAGMQVKVVYGDGSTNSAQAAI
QQAIAQGADGIALVVVDPTTVQHAVDQAEAAGIVVSDVLNRSTGDPMPHGVSGQMVLNLP
AEMDAMAGWILADSKCSANTLMYAPSALPITAAAAKLLGQRYTQLCPSCRFELKDLDYGN
FASTLTAEVQTDVRRIPGLDHVIAIVGSSVPNVDAGLQGNAGIRVVAHDGLADNLQSMRE
NRTHEAADFAFAPTGSIGWQLVDQQARLMVEQSGAAEVIIPSRLVDKGNLGANESDVWPG
YAHFEQAYTDEWHGQP
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaaagaacaatagtcgccacgggactgatcacgatcaccgccgcggcgaccttg
gccggctgcggcgccggcgaacacgacagcgccgcgacgatgaccgaccaggcccgggcc
cagtgcgtgacgagcgcggggcgactgcgggactcgatgctgaaggaaccggcgctgaag
atgctcggcgcgttcgacatcacgaaggccgagggcaagtcgctgtggatcgtcaacgcc
gcgcgagtgccgttcctgcaagggatctccgacggggcggccgccgcggcgaaggccgcc
gggatgcaggtgaaggtggtgtacggcgacgggtcgaccaactcggcccaggcggcgatc
cagcaggcgatcgcacagggcgccgacggcatcgcgctcgtggtggtggatccgacgacc
gtgcagcacgccgtggaccaggccgaggcggccgggatcgtggtcagcgacgtgctcaac
cgcagcaccggcgacccgatgccccacggggtttcgggccagatggtgctgaacctgccc
gccgagatggacgcgatggccggctggatcctggccgattcgaagtgcagcgcgaacacg
ctgatgtacgcaccgtccgccctgccgatcacggccgccgcggcgaagctgctcgggcag
cgctacacgcagctgtgcccttcgtgccgcttcgagctcaaggacctcgactacggcaac
ttcgccagcacgctcaccgccgaggtgcagaccgacgtgcgccggatccccggcctcgac
cacgtgatcgcgatcgtgggttcgtcggtgcccaacgtggacgccggcctgcaggggaac
gccggcatccgcgtggtcgcgcacgacgggctcgccgacaacctccagtcgatgcgcgag
aaccgcacgcacgaggccgccgacttcgccttcgcgcccaccggatcgatcggctggcag
ctcgtggaccagcaggcgcggctcatggtcgaacagagcggcgccgccgaggtgatcatc
ccgtctcgccttgtcgacaaaggcaacctcggcgcgaacgagagcgacgtctggcccggc
tacgcgcacttcgagcaggcctacaccgacgaatggcacgggcagccgtga
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