Amycolatopsis rhabdoformis: VSH64_22240
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Entry
VSH64_22240 CDS
T09694
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VSH64_22240
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
VSH64_22240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arhd02000
]
VSH64_22240
Transporters [BR:
arhd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
VSH64_22240
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
WSE34766
UniProt:
A0ABZ1ILL8
LinkDB
All DBs
Position
complement(4884257..4885375)
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AA seq
372 aa
AA seq
DB search
MFSRRGSMALAVLLLGGTLAACGAGEPKASAGLSGNALDMCVAKATELKKSKLAEPPLKV
LAPFDMAKNKGKSIWIINAARVPLLQRVSDGAQAAATAAGLSVKVVYGDGSTNTAQAAMQ
QAIAQGANGIALVAVDPTTIQDSVNQAAKAGIVVTDVGNRSVGDPLRPGVAGQLGYDVPA
EMAAMAGWIMADSKCSADTLMYSPSALSITSAGAKAFQAQYQALCPSCAFELKDLDYGNF
ASTLTAEVQTDLRRNPNLDYIFAIIGSSVPEVDAGLRGNDHVRVLTHDGLDDNLEALRKG
TTHVVANFAFAPNEAIGWQVIDQQGRLLLGEKDALDLTIPTRMVDATDIGATNDDIWPSF
TGAQKTYTAAWK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgttctctcgacgtggctcaatggcgctcgcggtgctgctcctcggcggtacgctcgcc
gcgtgcggagccggtgagccgaaagcctccgcgggattgtcgggaaacgcgctcgacatg
tgtgtggcgaaagcgaccgagctcaagaaatcgaagctcgccgagccgccgttgaaggtg
ctcgcgccgttcgacatggcgaagaacaagggcaagtcgatctggatcatcaacgccgcg
cgcgtgccgctgctgcagcgcgtgtccgacggggcccaggccgccgcgaccgcggccggg
ctgtcggtgaaggtcgtgtacggcgacggctccaccaacaccgcgcaggcggcgatgcag
caggccatcgcgcagggcgcgaacgggatcgcgctggtggccgtggatcccaccacgatc
caggattcggtgaaccaggcggcgaaagccggcatcgtggtgaccgacgtgggcaaccgc
agcgtcggcgacccgctgcggccgggcgtcgcggggcagctcgggtacgacgtgccggcc
gagatggcggcgatggccggctggatcatggccgactcgaagtgctccgcggacacgctg
atgtactcaccctcggcgctgtccatcacctccgccggcgcgaaggcgttccaagcccag
taccaggcgttgtgcccgagctgcgcgttcgagcttaaggacctcgactacggcaacttc
gcgagcacgctcaccgccgaggtgcagacggacctgcgccgcaacccgaacctcgactac
atcttcgcgatcatcggctcgtcggtgcccgaggtcgacgccggcctgcgcggcaacgac
cacgtgcgggtgctcacccacgacggtctcgacgacaacctcgaagcgctgcgcaagggc
accacgcacgtggtcgccaacttcgcgttcgcgccgaacgaagccatcggctggcaggtg
atcgaccagcagggccggctcctgctcggggaaaaggacgcgctcgacctgaccattccc
acccgcatggtcgacgccaccgacatcggcgccacgaacgacgacatctggcccagtttc
accggagcgcagaaaacctacacagccgcttggaaatag
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