Amycolatopsis rhabdoformis: VSH64_22800
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Entry
VSH64_22800 CDS
T09694
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd03030
DNA replication
arhd03430
Mismatch repair
arhd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VSH64_22800
03430 Mismatch repair
VSH64_22800
03440 Homologous recombination
VSH64_22800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arhd03032
]
VSH64_22800
03400 DNA repair and recombination proteins [BR:
arhd03400
]
VSH64_22800
Enzymes [BR:
arhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VSH64_22800
DNA replication proteins [BR:
arhd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VSH64_22800
DNA repair and recombination proteins [BR:
arhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VSH64_22800
BRITE hierarchy
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
Asparaginase_C
Motif
Other DBs
NCBI-ProteinID:
WSE34872
LinkDB
All DBs
Position
complement(4986390..4987361)
Genome browser
AA seq
323 aa
AA seq
DB search
MTTAPAPLHLVLGEEELLIERAVRSSLDAARAVDSTAEMTRNRVSELTPPVLAELVSPSL
FSEGRVIVLDSAQDISQELSDAVMAYLKAPADGIVLVVVHTGGGRSKAAKALPAALKKAG
AEITECPKLTKPAERESFVRNEVRRAGGKIDAGGVMALLDTVGSDLRELSSAATQLVADT
GGVVDEQAVRRYHTGRADVTGFAVAEKAVGGDRAAALESLRWAMQLGVPHVLVADALADA
VRTIARVSAAGRGNPNQMAGELGMPPWKIRKAQGQSRGWGQDGLATAMRVVARLNAEVKG
VAADADYALERAVVDVVAAKGER
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccgcacccgcgccgctgcacctcgtcctcggtgaggaagaactgctcatcgag
cgggctgtccgctcgtcgctggacgccgcgcgcgccgtggattccacggccgagatgacg
cgcaaccgggtgtcggaactcacaccgcccgtgctcgccgagctggtgagtccttcgctg
ttcagcgagggccgggtcatcgtgctcgactcggcgcaggacatctcgcaggagctgtcc
gacgcggtgatggcgtacctcaaggcgcccgcggacggcatcgtgctcgtggtcgtgcac
accggcggcggccgcagcaaggcggccaaggcgctgcccgcggcgctgaaaaaggcgggc
gcggagatcaccgagtgcccgaagctcacgaagcccgccgagcgggagtcgttcgtgcgc
aacgaggtgcgccgcgccggcggcaagatcgacgcggggggtgtcatggcgctgctcgac
acagtcggctccgacctgcgcgagctctcctccgcggcgacccagctcgtcgccgacacc
ggcggcgtggtcgacgaacaggccgtgcgccgctaccacaccggccgcgccgacgtgacc
ggcttcgccgtggccgagaaggccgtcggcggcgaccgcgcggcggccctggagtcgctc
cgctgggccatgcagctcggcgtgccgcatgtcctggtcgccgacgccctcgccgacgcg
gtccgcacgatcgcccgcgtgtcggccgccggccgcggcaacccgaaccagatggcgggc
gagctgggcatgccgccgtggaagatccgcaaggcgcagggccagtcccgcggctggggc
caggacggcctcgccaccgcgatgcgcgtggtcgcccgcctgaacgccgaggtcaagggc
gtggccgccgacgcggactacgcgctggaacgcgcggtggtcgatgtcgtggccgcaaag
ggcgaacgctga
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