Amycolatopsis rhabdoformis: VSH64_23620
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Entry
VSH64_23620 CDS
T09694
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
arhd
Amycolatopsis rhabdoformis
Motif
Pfam:
nSTAND1
WD40
ANAPC4_WD40
NBCH_WD40
HTH_31
Ge1_WD40
AAA_16
HTH_3
HTH_19
ABC_tran
RsgA_GTPase
NACHT
AAA_29
nSTAND3
Guanylate_kin
Motif
Other DBs
NCBI-ProteinID:
WSE35024
LinkDB
All DBs
Position
complement(5174207..5177776)
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AA seq
1189 aa
AA seq
DB search
MTQFGRELRRIRGERALTLAALASLTHYSKGYLSKIETGTKPASTDLARRLDTALDAGGH
LVRVLTAELARPRADVSPYRGLAAFSGEDSAWFFGRGDLIDEALETTRRAAGKPVVLVGP
SGAGKSSLLHAGLLPALARGRVPGSASWPVLTLTPTDDPGAELARRAALVPDTAAERIVL
VVDQFEELFTHSVTEATRTAFVRVLAGAAATGRALVVLALRADFYDRCLVYPELVDALRA
NQLTVGPMSPEQLREAITAPAEHAGLTLEPGLADLLLAEAEPDALPLLSHALLATWEERE
GTTLTVAGYRRTGGIGDAVAATAERVHAALPQRARGAARALLVHLVRIGDHEPDARRRIE
RSTLRRQLPDPAGTELAVDALATARLLTVDKGTVTIAHEALLRAWPRLRGWIDSDRAGLQ
LQQRLRDAAQQWERGGRDRDLLYRGPRLDLAEDWATAHRDRLGSAEREFLAAARALEHSA
RFEARRRARRLRRLAVGLAVMTVLAVAATAVAVTQSVAASKARDEAVSRALASESNELRL
TDPSLATRLSLAAYRVADTPEARGSLLDSSGDTQVRELDGHPSPIRRIAAIGGGDTVVTT
GDDGSTRLWTVTGGASLVPAATIAGEGDEPTFAEAGGILVTTGKTGPTRVWRDGAWAAPV
ATFAAGPVTAAALSSDAAQLALGHPDGTISLWDTANPVAPTATLTGHTGAVVSLAFVPGS
RVLVSGSEDFTARLWSPGRPGTVLGTTKAAVRSVAAAPGVIAVGSDDHSLALWSVTGVRT
ALLTSDTRAVHDLAFSPDGRTLAATGDDQTAQLWNVAEGTSLTVLNQPAPVRGAAFAAHG
GLLVTGDDVGHLWLWHLPPPVVTVAAGVNSVVYRPRGDGYALGEDDGTVQLRLGGRVTNL
VTGGAAIRTVVFSPDGAVLAAGGEDGVVHLWSLTGGEAAALARFPTGDGQLGAVAFDPTG
RVLATGGDGRVVRLWIVGRTPALLDELRGHDNTIWGLAFSPDGATLASSGDDYTARFWHV
RDPRHATAAGKLPWLPNSVNTVAFSPDGRLLATGGDDHTVRVWDFTTSPPTQWAELTAHG
DAVQSVAFSPDGRLLASSADDHTARLWDVTDPHAPVALANLTGHTDVVGSVAFSPDGARL
ATAGTDHAVRFWLTDAAASARTICASSVPALSADEWSRYAAGAAPRPLC
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcagttcgggcgggagctccgccggatccggggtgaacgggcgctcacgctcgcc
gcgctggcgtcgctcacgcactacagcaagggctacctgtcgaagatcgaaacgggcacg
aagcccgcgtcgacggacctcgcgcgccgtctcgacacggcgctggacgccggtggtcac
ctggtgcgcgtgctgaccgccgagctggcgcggccgcgggcggacgtgtcgccctaccgc
gggctggcggcgttctccggtgaggacagcgcgtggttcttcggccgcggcgacctgatc
gacgaggccctcgagaccacccgccgggccgccggcaaaccggtggtcctcgtgggcccc
tcgggcgccggcaaatcgtcgctgctccacgccgggctgctgccggcgctcgcgcgcggc
cgcgtgccgggttcggcgagctggcccgtgctcacactcacgcccaccgacgacccgggt
gccgagctggcccgccgcgcggcgctcgtgcccgacaccgcggccgagcggatcgtgctc
gtggtcgaccagttcgaagagctcttcacccacagcgtcaccgaagccacgcgcaccgcc
ttcgtgcgggtgctcgccggagccgccgccacgggccgcgcgctcgtggtgctcgcgctg
cgcgccgatttctacgaccgttgtctcgtgtaccccgagctggtggacgccttgcgcgcc
aaccagctcacggtcggcccgatgtcgcccgagcagctgcgcgaggcgatcaccgcgccg
gccgagcacgcggggctgaccctcgaacccggcctcgccgacctgctgctggccgaagcc
gagcccgacgcattgccgctgctgtcccacgcgctgctggcgacctgggaggaacgcgag
ggcaccacgctcaccgtcgcgggctaccggcgcaccggcggcatcggcgacgccgtggcc
gccaccgccgagcgcgtgcacgcggctctgccccagcgcgcccgcggcgccgcccgcgcg
ctgctcgtgcacctcgtgcgcatcggcgaccacgagccggacgcgcggcggcgcatcgag
cgctcgacgttgcgccgccagctgccggacccggccgggaccgagctggccgtggacgcg
ctggcgaccgcccggctgctcaccgtggacaagggcacggtcacgatcgcccacgaagcc
ctgctgcgcgcgtggccgcggctgcgcggctggatcgactcggaccgcgcgggattgcag
ctgcagcaacggttgcgcgacgccgcgcagcagtgggagcgcggcggccgcgaccgcgac
ctgctctaccgcggcccgcggctcgacctggccgaggactgggccaccgcgcaccgcgac
cggctcgggtccgccgaacgggagttcctcgccgccgcgcgggccctcgaacattccgcg
cgcttcgaagcgcgccgccgcgcgcgaaggctgcgtcgcctggccgtggggctcgccgtg
atgacggtgctcgcggtggcggccacggccgtggccgtgacgcagagcgtggccgcgagc
aaggcccgcgacgaggcggtgtcgcgggcgctggcgagcgagtcgaatgagctgcgcctc
accgatccgtcgctggccaccaggctgagcctcgccgcctaccgcgtcgccgacaccccc
gaggcgcgaggcagcctgctcgactcctccggcgacacccaggtccgtgagctcgacggg
cacccgtccccgatccggcggatcgccgcaatcggcggaggcgacaccgtggtgaccacc
ggcgacgacgggtccactcgcttgtggacggtcaccggcggcgcgtcgctcgtgccggcc
gccaccatcgccggggaaggcgacgagccgacgttcgccgaagccggtggaatcctcgtg
accaccggaaaaaccggtccgacgcgggtgtggcgcgacggcgcgtgggcggcgccggtg
gccacgttcgccgcgggcccggtcaccgcggccgccctcagctccgacgccgcgcagctc
gcgctcggccaccccgacggcacgatttccttgtgggacacggcgaacccggtcgcgccg
acggccacgctcaccggccacaccggcgccgtcgtgtcgctcgcgttcgtgcccggctcg
cgcgtgctcgtgagcggcagcgaggacttcaccgcgcgcctgtggtcgcccggccggccg
ggcaccgtgctcggcaccacgaaggcggccgtgcgttcggtcgccgccgcaccgggcgtg
atcgcggtcggcagcgacgaccattcgctcgcgctgtggtcggtcaccggcgtgcgcacg
gcgttgctgacctccgacacgcgcgccgtgcacgacctcgcgttcagtcccgacggccgc
accctcgccgcgaccggcgacgaccagaccgcgcagctgtggaacgtcgccgagggcacc
tcgctcaccgtgctcaaccagcccgcgccggtccgcggcgccgcgttcgccgcgcacggc
ggcttgctcgtgaccggcgacgacgtcgggcacctgtggctctggcacctgccgccgccg
gtcgtcacggtggcggccggcgtgaactccgtggtttaccggccccgcggcgacggttac
gcgctcggcgaagacgacggcacggtgcagttgcggctcggcggccgcgtcacgaacctg
gtcaccggcggcgcggcgatccgcacggtggtgttctcgcccgacggcgcggtgctcgcc
gccggtggtgaagacggtgtggtgcacctgtggtcgctcaccggcggtgaagcggccgcg
ctcgcgcggttcccgaccggagacggccagctcggcgcggtggccttcgacccgaccggg
cgcgtgctcgccacgggcggggacgggcgcgtggtgcggctgtggatcgtcggcaggacc
ccggcgctgctcgacgaactgcgcgggcacgacaacacgatctggggcctggccttcagc
cccgacggcgccacgctcgccagttcgggcgacgactacacggcgaggttctggcacgtg
cgcgacccgcgccacgccacggcggccgggaaattgccgtggctgcccaactccgtgaac
accgtcgccttctcacccgacggccgcctgctcgccaccggcggcgacgaccacaccgtg
cgcgtgtgggacttcaccacgagcccgccgacgcagtgggccgagctcaccgcccacggc
gacgccgtgcagtccgtggccttcagccccgacggccggctgctcgccagctccgccgac
gaccacacggcccggctgtgggacgtcaccgacccgcacgcaccggtggcgctcgcgaac
ctcaccgggcacacggacgtggtcggctccgtcgccttcagccccgacggtgcccgcctc
gccacggccggcaccgaccacgccgtgcgcttctggctcaccgacgccgcggcttccgcg
cgcacgatctgcgcctcgtccgtgcccgcgctcagcgccgacgagtggtcgcgctacgcc
gccggcgccgccccgcgccccctctgctga
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