Amycolatopsis rhabdoformis: VSH64_24735
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Entry
VSH64_24735 CDS
T09694
Name
(GenBank) helicase HerA-like domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arhd03400
]
VSH64_24735
DNA repair and recombination proteins [BR:
arhd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
VSH64_24735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
ResIII
TrwB_AAD_bind
AAA_16
AAA_30
FtsK_SpoIIIE
T2SSE
Zeta_toxin
CbiA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WSE26086
LinkDB
All DBs
Position
complement(5422411..5423952)
Genome browser
AA seq
513 aa
AA seq
DB search
MAEQGSGPAAEIAQGYVSEGAAVELGAVVIDGKAEAAAAVRLPLATLNRHGLVAGATGTG
KTKTLQLISEQLSAAGVPVVLADVKGDLSGLSAAGEANDKLTRRAQELGDDWAPAASPVQ
FLSLGTGGKGSPIRATITSFGPVLLSKVLGLNETQESTLGLIFHWADQRGLALLDTKDLR
SVITHLTSDEGKADLKGIGGVSAATAGVILRALSNLEAQGGEDFFGEPELDVHDLMREVD
GKGVVTLLELDNLQSKPALFSTFLMWLLAELFEELPEEGDLDKPKLVFFFDEAHLLFADA
SKAFLERIEQTVKLIRSKGVGVFFCTQLPTDIPNAVLSQLGARVQHALRAFTPDDQKALA
RTVKTYPKTPHYDLETALTSLGIGEAIVTVLSERGAPTPVAWTRLRAPRSKMGSVGDEAV
AATVASSELHAKYSETIDRESAYEKLAAKVAPAESPATAPAAPAEAPAPKPEKEDPGLIS
QAMSNPAMKSFMRSAASALGREITRGLFGNRRR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtggccgagcaggggtcggggcctgcggcggagatcgcgcaggggtacgtgagtgagggc
gccgcggtggagctgggcgccgtggtgatcgacgggaaggccgaggcggccgcggccgtg
cggctgccgttggccacgctgaaccgccacggtctggtggcgggcgcgaccggcacgggc
aagacgaagacgttgcagctgatctcggagcagctttcggccgccggggtgccggtggtg
ctggccgacgtgaagggcgacctttcgggcctgtcggcggcgggcgaggcgaacgacaag
ctcaccagacgcgcgcaggagctgggtgacgactgggcgccggccgcgagccccgtgcag
ttcctgtcgctgggcaccggcggcaagggctcgccgatccgcgccacgatcacgagcttc
ggtccggtgctgctgtcgaaggtcctgggtctcaacgagacgcaggagtcgacgctcggc
ctgatcttccactgggccgaccagcgggggctcgccctgctcgacacgaaggacctgcgg
tcggtcatcacccacctgaccagcgacgagggcaaggccgacctcaagggcatcggcggc
gtctcggcagccacggccggggtgatcctgcgcgcactgtccaacctggaagcccagggt
ggcgaggatttcttcggcgagcccgagctcgacgtgcacgacctgatgcgcgaggtcgac
ggcaagggcgtggtgacgctgctggagctggacaacctgcagtcgaagccggcgttgttc
tcgacgttcctgatgtggctgctggccgaactgttcgaggagctgcccgaggagggcgac
ctcgacaagccgaagctcgtgttcttcttcgacgaagcgcacctgctcttcgccgacgcg
tcgaaggcgttcctggagcgcatcgagcagacggtgaagctgatccggtcgaagggtgtc
ggcgtgttcttctgcacgcagcttcccaccgacatccccaacgccgtgctgtcccagctg
ggcgcgcgggtgcagcacgcgctgcgggcgttcacgccggacgaccagaaggccctggcc
aggacggtgaagacctacccgaagacgccgcactacgacctcgagacggcgctgacgtcg
ctcgggatcggcgaggcgattgtcacggtgctgtcggagcggggtgcgccgacgccggtc
gcgtggactcggctgcgggcgccgcggtcgaagatgggttcggtcggcgacgaggcggtg
gccgcgacggtcgcgtcgtcggagctgcacgcgaagtactcggagacgatcgaccgggag
tcggcgtacgagaagctggcggcgaaggtggctcctgccgagtcgcccgcaaccgcgccg
gccgcgcctgccgaagcgcccgcgcccaagcccgagaaggaggacccgggcctgatttcg
caggcgatgagcaacccggcgatgaagtcgttcatgcgctcggccgcgtcggcgttgggc
cgggagatcacgcgcgggctgttcggcaatcggcggcggtga
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