Amycolatopsis rhabdoformis: VSH64_25425
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Entry
VSH64_25425 CDS
T09694
Name
(GenBank) LuxR C-terminal-related transcriptional regulator
KO
K21685
LuxR family transcriptional regulator, regulator of acetate metabolism
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arhd03000
]
VSH64_25425
Transcription factors [BR:
arhd03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
VSH64_25425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
GAF_2
GAF
Sigma70_r4
Sigma70_r4_2
HTH_24
HTH_23
HTH_10
DUF742
DUF3071
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
WSE26219
LinkDB
All DBs
Position
5527978..5528850
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AA seq
290 aa
AA seq
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MNGNELRSRRPSPAWPATSATVDEGLATRRIIDELLPERLERLRKVTGLPIALGGTTRHG
SAGLHLVLDRLTGNSGDALRGLVVQPGKGLGGCVLRSRSPFRVNDYASTMAITHEYDPAV
RQEGLTSVFAVPVLVRGEVRGVLYGAVRAGNPIGDRTVRSALVVAEQLQSDVEGRLRRDP
GHVATRSRGALAELAALIRDTTDPQLRTRLERIQADLTGETSRAEPTASLAPREIDVLRL
AEVGASNLEIAARLGLSLETVKAYLRSAMRKLEVHNRTAAAHQARLNGLL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaaacgagctgcggtcgcgccggccctcgccggcgtggccggcgacttcggcc
acagtggacgaaggactcgcgacccggcggatcatcgacgaactgctgcccgagcggctg
gagcggctgcggaaggtgaccggcctgccgatcgccctcggcggcaccacccgccacggc
agcgccggcctgcacctggtgctcgaccggctcaccgggaactccggcgacgcgttgcgc
ggactcgtggtgcagcccggcaaggggctcggcggctgcgtgctgcgcagccgaagcccg
ttccgggtcaacgactacgcgtccaccatggccatcacgcacgagtacgacccggcggtg
cgccaggagggtctcacgtcggtgttcgccgtgccggtgctcgtgcgcggcgaggtgcgc
ggggtgctgtacggcgcggtgcgggcgggcaacccgatcggcgaccgcactgtgcgcagc
gcgctggtggtcgccgagcagctgcagtccgatgtggagggccggctgcgccgcgacccc
ggtcacgtcgccacccgctcccgcggcgcgctggccgagctggccgcgctcatccgcgac
accaccgacccgcagctgcgcacccggctggagcggatccaggcggacctcaccggcgag
acctcccgagccgagcccacggcgtcgctggcgccgcgcgagatcgacgtgctgcggctg
gcggaggtgggcgcgagcaacctcgagatcgccgcgcggctgggcctgagcctcgagacg
gtcaaggcgtacctccgatcggcgatgcgcaaactggaagtgcacaaccgcaccgcggcg
gcgcaccaggcccggctcaacggtctgttgtag
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