Amycolatopsis rhabdoformis: VSH64_25830
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Entry
VSH64_25830 CDS
T09694
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VSH64_25830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arhd03400
]
VSH64_25830
Enzymes [BR:
arhd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
VSH64_25830
DNA repair and recombination proteins [BR:
arhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VSH64_25830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
WSE26298
LinkDB
All DBs
Position
complement(5610234..5610875)
Genome browser
AA seq
213 aa
AA seq
DB search
MTPEEHLRQADPVLGRAMAEITGRPPKLPPDGEAADDPDIPKDDYGVLVRAIVSQNISIH
ASRAIFRKLKDRFGGRVPTPEELLADDPEQLRPAAGLSRAKTVSLRSLADCILSGRLDLD
ALDGLPDDEVVAQLSLVKGIGVWTAQMFLMFHLHRPDVLPVGDLELRRSVAQVYGLAARP
TPAELTRLAEPWRPYRTLASLYLWQLAEQAPRL
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgaggagcacctgcggcaggccgatccggttctcggccgggcgatggccgag
atcaccgggcggccaccgaagctgccgccggacggcgaagccgccgacgacccggacatc
ccgaaggacgactacggcgtgctcgtgcgcgcgatcgtgagccagaacatctcgatccac
gcctcgcgcgcgatcttccggaagctgaaggaccgcttcggcggccgcgtgccgacgccc
gaggagctgctggccgacgaccccgagcagctgcgcccggccgccggtctgtcgcgcgcg
aaaacggtgtcgctgcgctcgctcgccgactgcatcctgtccggccggctcgacctcgac
gcactcgacggcctgcccgacgacgaggtggtcgctcagctctccctggtcaagggcatc
ggcgtgtggacggcgcagatgttcctgatgttccacctccaccgccccgacgtgctgccg
gtcggtgacctcgagctgcgccgcagcgtcgcgcaggtgtacggcctcgccgcgcgcccg
acaccggccgagctcacgcggctggccgaaccgtggcggccctaccgcacgctggcgagc
ctgtacctgtggcaactggccgagcaggcaccgcggttgtga
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