Amycolatopsis rhabdoformis: VSH64_27160
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Entry
VSH64_27160 CDS
T09694
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VSH64_27160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arhd02000
]
VSH64_27160
Transporters [BR:
arhd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
VSH64_27160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WSE26559
LinkDB
All DBs
Position
5922818..5924629
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AA seq
603 aa
AA seq
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MARHRWRAALGVTLAAALALSGCATSREQHGGGAGKPVTGGTARFALPPSATPNWILPIS
IPGYGASYNGVVRNELYVPLYNYDGSSGSVTLDDPSSAANPPSYSAGGSTVTITLKPLSW
SDGTPLSSRDVEFWLNLVRAGKDDWGKYSEGLMPDNIKAFHLVDEHTFTLTLDKPYNADW
FTANQLSLVVPMPQKAWDRTSAAGPVGDFDRDPAGAKQVFDFLVGQAKQLGTYATNPLWK
VVNGPFTLGGFTASGQVTLNKNPKYTGPDAAKLDTVQFLTFTSSSAEYNVLRAGGVDYGY
VPTTNLGQRPELEAQGYRVEPWNGWSITYSPFNFNNPQLGNAFKQLYVRQALQRAVDQDA
ITKVIWRGTARVDYGPVPQDNDGKYLSPRQKTNPYPFDLTAARKLLTDHGWAPGSDGVLQ
CASPGNAPAQCGEGVAGGTRLSLTMLTESGSDETDGTMQELRSELSKIGVEMKINAQPLN
TVLANGTACKPQEPSCSWQLSYFGTQGSWYFPANPSGEDLFATDAGTNFGSYSDRHADEL
ITATNRATGAEPMLDYSAYLAEQLPVLWLPNPPYQVSAIDTALRGVSQDPLAGLLPQRWY
WTR
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggctcgacaccggtggcgcgccgcgctcggggtcacgctcgccgccgcgctggcgctg
tccggctgcgcgacgagccgtgagcagcacggcggcggcgcgggcaagccggtgaccggc
ggcaccgcgcggttcgcgctgcccccgtcggcgacccccaactggattctgccgatctcg
atccccggctacggcgcgagctacaacggcgtggtccgcaacgagctgtacgtgccgctg
tacaactacgacggcagctcgggctcggtcacgctcgacgatccctccagcgccgcgaac
ccgccgagctactcggccggcggctcgaccgtgaccatcacgctcaagccgctcagctgg
tccgacggcacgccgctgtcgagccgggacgtcgagttctggctcaacctggtgcgcgcg
ggcaaggacgactggggcaagtactccgaaggcctgatgcccgacaacatcaaggctttc
cacctggtcgacgagcacaccttcacactcaccctcgacaagccgtacaacgccgactgg
ttcacggccaaccagctcagcctggtggtgccgatgccgcagaaggcctgggaccgcacg
agcgcggccggcccggtcggcgacttcgaccgcgacccggccggcgccaagcaggtgttc
gacttcctggtggggcaggcgaaacagctcggcacgtacgccacgaatccactgtggaag
gtcgtgaacgggcccttcacgctcggcggcttcaccgcgtcgggccaggtcacgctgaac
aagaacccgaagtacaccggcccggacgcggcgaagctcgacacggtgcagttcctcacg
ttcaccagctcttcggccgagtacaacgtgctgcgcgccggcggcgtcgactacggctac
gtgccgaccacgaacctcggccagcgcccggaactcgaggcgcagggctaccgggtcgag
ccgtggaacggctggtcgatcacctactcgccgttcaacttcaacaacccgcagctgggc
aacgcgttcaagcagctgtacgtgcgccaggccctgcagcgggccgtggaccaggacgcc
atcaccaaggtgatctggcgcggcaccgcccgcgtcgactacggcccggtgccgcaggac
aacgacgggaagtacctgtcgccgcggcagaagaccaacccgtaccccttcgacctcacc
gcggcgcgcaagctgctcaccgaccacggctgggccccgggctctgacggcgtgctgcag
tgtgcgtcgccgggtaacgcgccggcgcagtgcggcgaaggtgtcgccggtggcacgcgg
ttgtcgctcaccatgctgaccgagtcgggctccgacgagaccgacggcaccatgcaggag
ctgcgctcggagctgtcgaagatcggcgtcgagatgaagatcaacgcgcagccgctgaac
accgtgctggccaacggcacggcgtgcaagccgcaagagccgtcgtgctcgtggcagctg
tcgtacttcggcacgcagggcagctggtacttcccggccaacccgagcggcgaagacctg
ttcgccaccgacgcgggcacgaacttcggcagctactccgaccgccatgccgacgagctg
atcaccgcgaccaaccgggccaccggcgccgagccgatgctcgactacagcgcctacctg
gccgaacagctgcccgtgctctggctgcccaacccgccgtaccaggtgtcggcgatcgac
accgcgctgcgcggggtgagccaggatccgctggccgggctgctgccgcagcgctggtac
tggacgaggtga
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