Amycolatopsis rhabdoformis: VSH64_27195
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Entry
VSH64_27195 CDS
T09694
Name
(GenBank) glycoside hydrolase family 2 TIM barrel-domain containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00052
Galactose metabolism
arhd00511
Other glycan degradation
arhd00600
Sphingolipid metabolism
arhd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
VSH64_27195
09103 Lipid metabolism
00600 Sphingolipid metabolism
VSH64_27195
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
VSH64_27195
Enzymes [BR:
arhd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
VSH64_27195
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Glyco_hydro_2_N2
Glyco_hydro_2
BetaGal_ABD2
DUF7490
Motif
Other DBs
NCBI-ProteinID:
WSE26566
LinkDB
All DBs
Position
complement(5930694..5932781)
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AA seq
695 aa
AA seq
DB search
MRRWLPVVLALALSLSVTPAISAEVAPRAGGVTRGETDLDAGWRFVRADVPGAEQPGYAD
SSWTRTSVPHTWNALDGQDGGGNYYRGAGWYRKHVTPAKALAGKRLWLQFDGVNTVADVW
VNGVHLGQHRGGYATFRFDATDALKPGRDNVIAVRVDNSAQADVAPLSADYTFFGGIYRD
VSLVAVDPLAVRLDDFGGPGFYLTQRSVTAEQALVDVVTKVRNSSGAPRDVRVRTTVADA
RGRVVTRTMSEPQRITGDLDVAQQLAITDPHRWQGTADPYLYRASVDVLDARTGRVTDTV
SQPLGLRTSTVDANQGFFLNGQHLALHGVNAHQDRLDEGWAVADRQRDQDFDLMDEMGVN
ALRTAHYQQSQHVYDLADQRGYVVWAEIPLVNGITDSAAFRANATQQMSELIRQNFNHPS
IAFWGIGNEQAKNDAVTNGILQDLADQVKAEDPARLSVYANHKGGQDAVSGHADLAAYNK
YYGWYDLSAPGPGPWTDQLHAADPARKIAISEYGAGGSVFDHVENSTVKPPVIPSRVHPE
EYETFVHENSWKQIETRPYLWGTFVWNMFDFASDGRTEGDTLGRNDKGLVTYDRQTRKDA
FYWYKANWTTTPFVYLTSRRWTSRTEAATTVKAYGNGVDTVSLTLNGTPVGAPAASPDHI
YTWPVTLAPGKNVVKVSGVKGGHAYTDTVTWTLTP
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtgcggcgctggttgcccgtggtgttggccctggccctgagtttgtccgtcaccccggcg
atctcggcggaggtggcgccgcgcgcgggcggcgtgacgcgcggcgagaccgacctcgac
gccgggtggcggttcgtgcgcgccgacgtgccgggtgccgagcagcccgggtacgcggac
tcgtcgtggacgcgcacgagcgtgccgcacacctggaacgcgctcgacggccaggacggc
ggcggcaactactaccggggcgccggctggtaccgaaaacacgtgaccccggcgaaggcg
ttggccggcaagcggttgtggctgcagttcgacggcgtgaacacagtggccgacgtgtgg
gtcaacggcgtgcacctcggtcagcaccgcggcggttacgcgaccttccgcttcgacgcc
accgacgcgttgaaacccgggcgcgacaacgtgatcgcggtgcgcgtggacaactcggcg
caggccgacgtggccccgctcagcgccgactacacgttcttcggcggcatctaccgcgac
gtctcgctcgtggcggtcgatccgctcgccgtgcggctcgacgatttcggcggcccgggc
ttctacctcacgcagcgctcggtcacggccgagcaggcgctggtcgacgtggtcaccaag
gtgcgcaacagttccggcgcccctcgcgacgtccgggtgcgcacgaccgtcgccgacgcg
cggggccgggtcgtgacgcgcacgatgtccgagccgcagcggatcaccggcgatctcgac
gtggcccagcagctggccatcaccgatccgcaccgctggcagggcaccgccgacccgtac
ctgtaccgcgcgagcgtggacgtgctcgacgcgcgcaccggccgcgtcaccgacaccgtg
agccagccgctcggcctcaggacgtccactgtggacgcgaaccagggctttttcctcaac
gggcagcacctggccctgcacggcgtgaacgcccaccaggaccgcctcgacgagggctgg
gccgtggccgaccggcagcgcgaccaggacttcgacctcatggacgagatgggcgtgaac
gcgctgcggaccgcgcattaccagcagtcgcagcacgtgtacgacctcgccgaccagcgc
gggtacgtggtgtgggccgagatcccgctcgtgaacggcatcaccgacagcgccgcgttc
cgcgccaacgccacgcagcagatgtccgagctcatccggcagaacttcaaccacccgtcc
atcgcgttctggggcatcggcaacgagcaggccaagaacgacgcggtgaccaacgggatc
ctgcaggacctcgccgaccaggtgaaggccgaggacccggcgcggctttccgtgtacgcc
aaccacaagggtggccaggacgccgtgtccggccacgcggatctcgcggcctacaacaag
tactacggctggtacgacctgtccgcgcccggccccggcccctggaccgaccagctccac
gcggccgacccggcgcgcaagatcgcgatcagcgagtacggcgccggcggcagcgtgttc
gaccacgtcgagaactccaccgtgaagccgccggtgatcccgtcgcgcgtgcacccggag
gagtacgagaccttcgtgcacgagaactcgtggaagcagatcgaaacgcggccctacctg
tggggcacgttcgtgtggaacatgttcgacttcgcctccgacggccgcaccgagggcgac
accctgggccgcaacgacaaaggcctggtcacctacgaccggcagacccgcaaggacgcc
ttctactggtacaaggccaactggacgaccacgccgttcgtctacctgaccagccgccgc
tggacctcgcgcaccgaagccgcgaccacggtgaaggcgtacggcaacggcgtggacacg
gtttcgctcaccctgaacggaacgcccgtcggcgcgcccgctgcgtcacccgaccacatc
tacacctggccggtcaccctcgcgcccggcaagaacgtggtgaaggtgagcggtgtgaag
ggcggccacgcctacaccgacacggtcacctggacgctgacgccgtag
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