Amycolatopsis rhabdoformis: VSH64_27415
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Entry
VSH64_27415 CDS
T09694
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13633
AraC family transcriptional regulator, transcriptional activator FtrA
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arhd03000
]
VSH64_27415
Transcription factors [BR:
arhd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
VSH64_27415
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
TetR_N
Lipase_GDSL_2
HTH_IclR
HTH_20
Motif
Other DBs
NCBI-ProteinID:
WSE26609
UniProt:
A0ABZ1HWP8
LinkDB
All DBs
Position
5984036..5985001
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AA seq
321 aa
AA seq
DB search
MSQESSHRVVMVVDDGSNPFEMGVATELFGLRRPELDRPWYEFTLASARTEVGMHLGMFT
LSGIAGLDAVDAADTVIVPNRPDPQVPADPGVLAAIRRAHARGARLMSFCTGAFTLAEAG
VLDGRRATTHWRWAAEFTARYPDVLLEPGVLFVDAGTVLTAAGSAAAMDLGLYVIQRDHG
AEIANTVSRRLVFPGHRDGGQQQFVERPVPVVADASLAPVLEWAREHLDRPLTVADLATR
AATSQATLHRRFRTELGTTPLAWLTTERVSLACRLLERGELRLDRVATDCGFGTAANLRA
QLRRHTGLSPSEYRRRFGPAA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagaatcctcgcaccgcgtggtgatggtcgtggacgacggctcgaacccgttc
gaaatgggcgtggcgaccgagctgttcggcctgcgccgcccggagctggatcggccgtgg
tacgagttcacgctggcctcggcgcgcaccgaagtgggtatgcacctggggatgttcacg
ctctcgggcatcgcggggctcgacgcggttgacgccgccgacaccgtgatcgtgccgaac
cggcccgacccgcaggtgccggccgacccgggtgtgctggccgcgatccgccgcgcgcac
gcccgcggcgcccggctgatgagcttctgcacgggcgccttcacgctggccgaggccggc
gtgctcgacggccggcgcgcgaccacgcactggcggtgggcggccgagttcaccgcgcgc
taccccgacgtgctgctggaacccggcgtgctgttcgtcgacgcgggcacggtcttgacc
gcggccggcagcgcggcggcgatggacctgggcctgtacgtgatccagcgcgaccacggc
gccgaaatcgccaacaccgtgagccggcgcctcgtgttccccggccaccgcgacggcggc
cagcagcagttcgtggaacggccggtgccggtcgtcgccgacgcgtcgctcgcgccggtg
ctcgaatgggcccgcgagcacctcgaccggcccctcaccgtcgccgacctggccacgcgc
gcggcgaccagccaggccacactgcaccgccgcttccgcaccgaactcggcacgacaccg
ctggcctggctcacgaccgaacgcgtgagcctcgcctgccgcctcctcgaacgcggcgaa
ctgcgcctcgaccgcgttgccaccgactgcggcttcggcacggccgccaacctgcgcgcg
cagctgcgccggcacaccggactgagcccttcggagtaccggcgccgcttcgggccggcg
gcctga
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